Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0705 ATGGATAGCACTACAAATACCTTGTTGCAAAGATATGAATTGGGAAGGCTACTAGGCCAAGGAACCTTTGGCAAGGTTTACTATGCAAGGAGCGCGATTACTAACCAGAGTGTGGCCATCAAAGTAATTGACAAAGATAAAGTTGTTAGAACCGGGCAATGCGAGCGGATTAAGAGGGAAGTAACTATTATGAGGTTGGTTCGTCATCCGTATATAATTCAGCTTCTTGAGATCATGGCCACCAAGAGCAAGATTTACTTTGTTATGGAGTATGCGAAAGGTGGCGAGCTTTTTGACCTTGTGGCCAAAGGAAAGCTCAAAGAAGAAGTTGCTTACAAGTATTTTAGGCAGCTAGTGAATGCAGTCGATTTTTGTCACAGTCGAGGTGTATACCATAGAGATATAAAGCCGGAGAATCTTCTGTTGGATGAGAATGAGAATCTTAAGGTGTCGGATTTTGGGTTGAGTGCGTTGGCCGAATCGAAAAGGAAGGACGGATTGCTGCATACAACTTGTGGAACTCCTTCCTATGTTGCCCCTGAAGTCATTAGAAGGAAAGGTTATGATGGTATAAAAGCTGATATTTGGTCTTGTGGAGTAGTTCTCTTTGTCCTGTTGGCAGGGTATCTCCCTTTTCATGATTCAAATTTGATCGAGATGTACAGAAAGATAAGCAAAGGCGAATTCATTTGTCCGAGTTGGTTCCCGAACAATGTCCGGCGGCTATTGTGCAAGATGTTGGATCCAGATCCAGAAAATAGGGCTACCATAGCTAAGATCAGGGAGTCATCTTGGTTTAGGAAAGGGCCAAATGCTAGACAGAAAAAGCTTGAAGTCGAAAACAAGTCCATCACAAATTGTGCTGATCAAAACAATGAAGGTGATAATGCAGTGGCTGAATCAAATCAAGAGCCGGCTGCTACAAGTATAAACGCCTTTGATATCATAAGCCTGTCCTCTGGCTTCAACCTTAATGGATTCTTTGAAGACAGTTTCCAGAAAAGGGAAGCAAGGTTTACTTCCAGACAGCCGGCACCCGTCATCATATCGAGGTTGGAAGAAATTGCGAAGCGGCTAAAGATGAAGATAAAGAAGAAGGCTGCTGGTTTGTTGAAATTAGAGGGACTCAAAGAAGGTAGGAAGGGGAATCTATCACTGGATGCGGAGATCTTTGAGGTTACTCCATATTTCCATTTGGTGGAAGTGAAAAAATCCAATGGGGACACAATGGAATATCAAGAAATTATGGATAAGGATATAAGGCCTGCCCTTAAGGACATTGTTTGGGTTTGGCAAGGTGAAAATCAACAAGAGCAATCACAACAGTCGGCACAACTGAAACATGAGAACGAAGAGCAGTAA 1362 0.4251 MDSTTNTLLQRYELGRLLGQGTFGKVYYARSAITNQSVAIKVIDKDKVVRTGQCERIKREVTIMRLVRHPYIIQLLEIMATKSKIYFVMEYAKGGELFDLVAKGKLKEEVAYKYFRQLVNAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRKDGLLHTTCGTPSYVAPEVIRRKGYDGIKADIWSCGVVLFVLLAGYLPFHDSNLIEMYRKISKGEFICPSWFPNNVRRLLCKMLDPDPENRATIAKIRESSWFRKGPNARQKKLEVENKSITNCADQNNEGDNAVAESNQEPAATSINAFDIISLSSGFNLNGFFEDSFQKREARFTSRQPAPVIISRLEEIAKRLKMKIKKKAAGLLKLEGLKEGRKGNLSLDAEIFEVTPYFHLVEVKKSNGDTMEYQEIMDKDIRPALKDIVWVWQGENQQEQSQQSAQLKHENEEQ* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0705 453 Gene3D Transferase(Phosphotransferase) domain 1 99 309 - -
Amo17g0705 453 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 445 - -
Amo17g0705 453 Gene3D Phosphorylase Kinase; domain 1 5 98 - -
Amo17g0705 453 Pfam NAF domain 308 365 IPR004041 GO:0007165
Amo17g0705 453 CDD CIPK_C 311 425 - -
Amo17g0705 453 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0705 453 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Amo17g0705 453 Gene3D Kinase associated domain 1, KA1 310 430 - -
Amo17g0705 453 SUPERFAMILY Protein kinase-like (PK-like) 9 281 IPR011009 -
Amo17g0705 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Amo17g0705 453 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0705 453 PANTHER - 2 445 - -
Amo17g0705 453 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0705 453 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0705 Amo-Chr17 16273274 16275935 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0705 1 440 CBL-interacting serine-threonine protein kinases AT5G58380 66.812 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo17g0705 Pkinase 2.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0705 - K07198 gmx:100779316 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0705 17 16273274 16275935 Amo17g0705 17 16273274 16275935 ECH
Amo11g0094 11 1205946 1208371 Amo17g0705 17 16273274 16275935 ECH
Amo17g0705 17 16273274 16275935 Amo11g0094 11 1205946 1208371 ECH
Amo11g0094 11 1205946 1208371 Amo17g0705 17 16273274 16275935 PCT
Amo17g0705 17 16273274 16275935 Amo11g0094 11 1205946 1208371 PCT