Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0699 ATGCCAGAGATCGAACAGGCGCCGCCGCATGCGGCGTCGGCAACTAGTAACACCTCCACATCCACCGTCACCACCTCCGCCTTATTTGGAAAATACGAGCTAGGAAGACTCCTAGGATGCGGCGCGTTCGCGAAGGTTTACTACGCGCGGAACGTGAAAACGATGCAGAGCGTGGCGATAAAGGTGATAAGCAAGAAGAAGATAATGGGAACGTCGCTGGTTTCGAACGTGAAGCGCGAGGTTTCGATCATGAGCAAGCTCAACCACCCGAACATCGTGAAGCTGCACGAGGTGCTGGCGACGAAGACCAAGATCTATTTCGTGTTGGAGTTCGTTAAAGGCGGTGAGTTATTTGCTAAGGTTTCGAAAGGGAGGTTCAGCGAGGATCTCGCCCGCAAGTATTTCCAGCAGCTTATCTCCGCCGTAGGGTACTGCCACTCGCGCGGCGTTTTCCACCGTGATTTGAAGCCGGAGAATCTCTTGCTTGATGAGAATGGGAATCTCAAGGTCTCCGATTTTGGACTCAGTGCCGTCAAAGACCAGGTGAGGTTTGATGGGTTGTTGCACACGTTGTGTGGCACTCCGGCTTACGTGGCACCGGAGATTCTGGCAAAGAAGGGCTACGACGGTGCAAAGGTTGATGTATGGTCTTGTGGGGTGATTCTCTTTGTTCTTGCAGCAGGGTACCTACCTTTCAATGATCCAAACTTGATGGTGATGTACAAGAAGATCTACAAGGGGGAGTACCGGTGTCCACGGTGGATGTCYCCGGATCTACGACGGTTCCTTTCAAGGGTTCTTGACATCAACCCCGAGACAAGGTTCACCGTTGATGAGATCACCAGGGACCCTTGGTTTAGAAAAGGCTACAAGGAGATCAAGTTTCATGAGGATTGGAATCTTGGGTCTGAGGACAAGGTGAAGGAATTGAATGCTTTTGATATAATCTCATTCTCTTCTGGTTTGAATCTTTCTGGATTGTTTGTTGGRGGTGGRGCCTCCACATCAGCGGCCGCAGAGGACACRGAGAGGCTCATGCTCAASGGTTCAGTTGAGGCGGTTTTGGCTAGGGTGGAGGAGGTGGCTGTGGCAGAGGGGCTTATAGTAAGAGGGTTGAAAGAATGTGGTGTGGAGCTAGAGGGGCAAAATYGTAATTTRGGYCTTGTGGTGGAGGTTTGCCGGGTAACTGCCAACCTGGTTGTGGTGGAGGCAACGAGGAAAACCGGGGATCTRTTCGGATTTAGGGATATGTGGAGGAACAAACTGACACCTAAGCTGTTAAGTAATGCTACCACAGAAAGTGATAGCATTTCTGATTCAGCAGAGACTCAATCGGAGATTTCCGAGTCTGAGCAAGTTGCTAGTGTCTGA 1371 0.5047 MPEIEQAPPHAASATSNTSTSTVTTSALFGKYELGRLLGCGAFAKVYYARNVKTMQSVAIKVISKKKIMGTSLVSNVKREVSIMSKLNHPNIVKLHEVLATKTKIYFVLEFVKGGELFAKVSKGRFSEDLARKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQVRFDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVILFVLAAGYLPFNDPNLMVMYKKIYKGEYRCPRWMSPDLRRFLSRVLDINPETRFTVDEITRDPWFRKGYKEIKFHEDWNLGSEDKVKELNAFDIISFSSGLNLSGLFVGGGASTSAAAEDTERLMLXGSVEAVLARVEEVAVAEGLIVRGLKECGVELEGQNXNLGLVVEVCRVTANLVVVEATRKTGDLFGFRDMWRNKLTPKLLSNATTESDSISDSAETQSEISESEQVASV* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0699 456 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Amo17g0699 456 ProSiteProfiles Protein kinase domain profile. 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0699 456 MobiDBLite consensus disorder prediction 431 456 - -
Amo17g0699 456 Pfam NAF domain 308 370 IPR004041 GO:0007165
Amo17g0699 456 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Amo17g0699 456 Gene3D Transferase(Phosphotransferase) domain 1 112 293 - -
Amo17g0699 456 Gene3D Phosphorylase Kinase; domain 1 21 111 - -
Amo17g0699 456 SMART serkin_6 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0699 456 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 452 - -
Amo17g0699 456 PANTHER - 1 452 - -
Amo17g0699 456 SUPERFAMILY Protein kinase-like (PK-like) 29 297 IPR011009 -
Amo17g0699 456 Gene3D Kinase associated domain 1, KA1 306 429 - -
Amo17g0699 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Amo17g0699 456 CDD CIPK_C 311 426 - -
Amo17g0699 456 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0699 Amo-Chr17 16130012 16133159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0699 1 427 CBL-interacting serine-threonine protein kinases AT2G30360 63.387 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo17g0699 Pkinase 2.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0699 - K12761 tcc:18591074 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0699 17 16130012 16133159 Amo17g0699 17 16130012 16133159 ECH
Amo17g0699 17 16130012 16133159 Amo07g0871 07 15897429 15900585 hybridization
Amo11g0091 11 1176178 1179657 Amo17g0699 17 16130012 16133159 PCT
Amo17g0699 17 16130012 16133159 Amo11g0091 11 1176178 1179657 PCT