Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0693 ATGGGTAATAACAAGTTCAGATTCTCAGATATGATTCCAAATGCTTGGTTCTATAAGCTCAAAGATATGAGCAAATCAAGGAAGAGGAATGGATCTCATCATGTTTTGAAGAACAACACCAATAGCAAGGTTACTTCACCAACAACATCACAAAGGTCACATCCAAGGTGTTCGAATTATTTCCCCAATGAAGCTTTTATAAGAGCTGGTAAGTTATACAACATCCCAATTCACAATAATAAAGAGTTTTTTGGTGGAACCATTCCATGTCCATTGATTGATTCTTCACCAAGAATGTCATCATCAAAGAGAAGGTCTAGGAGAAAAACCATTTACAAGCCTTCTCCAACTGTTGTTTCTTCTTCAACTTTCATGGTCAATTCTAATTTTGATTCGGCACACAACAACATTCAGTCACCAAATTATGATGCTTCTTCCGTTGAAAGCTCTTCTGAATCTGATGATGATTTCCATGAATATGTCTACTCTGAGTCTGAATGTGAAAGCTTTTCAGTTCCGGATTTGCTTAATGGTATAGACTCCAATTGCAGCTGCAGGGTTAGTTCTTCAACAAATGACATCATAATTGACATGAACAGTGAACATTTCAAGGGGGATATGAGCAAGAAAGATGGGCTTGAGACGATTTCGCAATCAGGCCTTGCTCCTATATTGACAAAGTCAGAGAGAAAGAGTGTTTCTTCCAATGGAAGTAAGAGTTCAAGGAATGCAGGGTTTCCGGATGGATATGCTGTGGTTAAGTCCTCATTTGATCCGCAAAGTGACTTTAGGGAGTCAATGTTAGAGATGATTGTCGAGAACAATATCCGTGCGTCAAAGGATCTAGAGGACTTGCTTTCCTGCTACCTCTCCCTAAATTCAAGTGAATTCCATGATCTCATTGTTAAAGCATTTGAGCAGATATGGTTTGATTTGGCTCAACTTAGAATATTAGCTATGTCTTCATTGGTTAGTACAGACATTGTCATCCAAAAATAG 999 0.3824 MGNNKFRFSDMIPNAWFYKLKDMSKSRKRNGSHHVLKNNTNSKVTSPTTSQRSHPRCSNYFPNEAFIRAGKLYNIPIHNNKEFFGGTIPCPLIDSSPRMSSSKRRSRRKTIYKPSPTVVSSSTFMVNSNFDSAHNNIQSPNYDASSVESSSESDDDFHEYVYSESECESFSVPDLLNGIDSNCSCRVSSSTNDIIIDMNSEHFKGDMSKKDGLETISQSGLAPILTKSERKSVSSNGSKSSRNAGFPDGYAVVKSSFDPQSDFRESMLEMIVENNIRASKDLEDLLSCYLSLNSSEFHDLIVKAFEQIWFDLAQLRILAMSSLVSTDIVIQK* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0693 332 Pfam Transcriptional repressor, ovate 256 312 IPR006458 -
Amo17g0693 332 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 230 316 - -
Amo17g0693 332 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 231 - -
Amo17g0693 332 Pfam DNA-binding domain 1 46 IPR025830 GO:0003677
Amo17g0693 332 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 230 316 IPR038933 GO:0045892
Amo17g0693 332 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 231 IPR038933 GO:0045892
Amo17g0693 332 MobiDBLite consensus disorder prediction 27 57 - -
Amo17g0693 332 ProSiteProfiles OVATE domain profile. 252 311 IPR006458 -
Amo17g0693 332 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 251 313 IPR006458 -
Amo17g0693 332 MobiDBLite consensus disorder prediction 35 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0693 Amo-Chr17 15818756 15820275 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Amo17g0693 Ovate 3.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0693 - - adu:107472156 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0693 17 15818756 15820275 Amo17g0693 17 15818756 15820275 ECH