Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0674 ATGAATCTTTCAAAGTGTGAAGTTGTTCTGTTCTTGTGGTTTTGCTGCTATTTGCTATTGGCTACTGCTCAGAATGGAGTCACTCACCCCAATGAAGTTAAGGCGTTGAGAGCCATAAAGAACAATTTGATTGATGTCAATAGAAATTTGAGTAATTGGAATCAAGGAGATCCGTGTATTAATAGATGGACAGGGGTTTTGTGTCACGACAGAAGATTTAACGATGGATATTTTCATGTTCGGGAACTGCAACTATTGAGAATGAACTTGTCTGGAAAATTGGCACCGGAGATTGGCAACTTCACTTATCTGGAAATATTGGATTTTATGTGGAACAAGATAAGTGGGACCATACCAAAAGAAATTGGCAACATCATTACCCTGAAACTCTTGCTCCTGAATGGAAATAAATTAATTGGTCCACTGCCAGAAGAGCTTGGCTATTTACCAAACTTGATCCGAATGCAAATTGATCAGAACAATATCAATGGATCTATACCTTCATCATTTGCAAACCTCAATGCCTGCAAGCACTTTCACATGAACAATAATTCACTTAGCGGCCCTATCCCGCCGGAGCTTTCCCAACTACCAAACCTTTTTCACCTGCTTCTTGACACAAACAACTTAACAGGAACACTTCCCCCTGATCTCTCTAAGATGCCACGCTTAAAGATTCTGCAGCTTGATAACAATAACTTTAGTGGAAGTACTATTCCCGAGTCTTATGGAGATATGTCACGTTTGTTCAAACTGAGCCTTAGGAACTGCAACTTGAAAGGACCAATTCCTGATTTGAGTAGGATACCAAACCTTTATTATATTGATCTCAGTCACAATCAGCTGAATGAAACAATTCCTACAAATCAGCTTTCTGGGAATATCACAACCATTGTGTTATCAAACAACAATCTCAGTGGAACTATTCCATTAAATTTTTCAAATCTTCCACGTCTTAAGAAATTATCAATTGCAAACAATAAATTGAGTGGCAACGTTCCCTCCTCCATTTGGCAGAACAAGACTTCAAGTGCAAATGAAAGCCTTATTGTGGACTTGCAAAACAATGAGCTCAACACCATATCAGGAAGTACTACTCTTCCTTCAAATGTCACACTCCAGCTTGGGGGAAATCCTCTATGCAAAAATAACAGCTTTGCTAAGTTCTGTGGATCTCAAGGTGTAACCGGGGGGAATGGTAGCTCCGGCATTAACTGTCCCGGTGAACCATGCTCCTCTCCTTATGAGTACTCTGTGGACTGTGTCTGTTCAGCTCCATTGTATGTTGATTACAGATTGAAAAGTCCAGGATTTGGATCAGATTTCCCTGCATTCATGAGTAACTTTCAAACATACCTCACTGATGGATTGAAAGTTGAGACTAATCAGCTGCACATTACTGATTATGAATGGGAAGAAGGGCCTCGGTTGCGAATGAACTTGAAGGTTTTTCCTGCAACTGTTAACAACACCACAACTAATCAGAAGTTCAATGATAGCGAGTATTCGCGGATTAGAAGCACGTTGACAGGGTGGAATATTAGTGACAGTGACTTGTTTGGGCCTTATGAACTTATGGATCTTCCTGCTTATAGTCAGGTGATTGTGGTGTCTTCAGGTTCAGGGCTAAGCAAAGGTGCACTGGCTGGAATAATCTTAGGTTCAATTGCGGTAGCAGTTACATTATCTGCAATTGTTTCCCTTCTTATATTGAGAATCAGATTGAGAGATTACCGTATACTTTCCAAACGGCAACATGGTGGAACAAGGATCTCAATAAAAATTGAAGGTGTGAGGGTATTTGTTTTTGAAGAGTTGGCAGCAGCAACTAATAATTTCAGTGAGTCTTCTCAAGTTGGACGCGGCGGGTATGGGAAGGTTTATAAAGGTATTCTTGCTGACGGCACTGCTGTCGCCATAAAACGTGCACAGGAAGGATCACTGCAAGGTGAGAGGGAGTTTCTTACAGAAATACAGTTGCTGTCGCGCCTGCATCACCGAAACCTTGTGTCTCTAATTGGATATTGTGATGAAGAGGGTGAACAGATGCTGGTTTACGAATATATGCCGAACGGAACGCTAAGGGATCACCTCTCGCCTTATTCAAGAACACCTCTGAGTTTTACAATGAGAATGAAGATTGCTCTAGGATCAGCTAAAGGTCTTTTGTATCTACACACAGAAGCTGATCCTCCAATATTCCACAGAGATGTCAAGGCCAGTAATATACTATTGGACTCTAAGTTCAATGCAAAGGTTGCTGATTTTGGACTTTCGCGACTCGCCCCGGTGCCAGATGTCGAAGGAGTTGTGCCTGGTCATGTATCTACAGTGGTAAAAGGGACCCCGGGTTACCTTGATCCGGAGTATTTCTTAACTCGCAAGTTAACAGACAAGAGTGATGTTTATAGTCTTGGTGTCGTGTTTCTGGAAATTGCAACCGGAAGGGCACCAATCTCCCATGGCAAAAACATTATAAGACAGGTTACTTCGGATTACCAATCCGGCGGTCTAGTTGCAGTTATGGATGAACGCTTGGGGCCTTGTCCTTCAGAATGTGTGCAACCATTTTTGACATTGGCTCTAAAGTGTTGCGAAGACGTGCCAGACGATAGGCCTAAGATGGCAGAAGTGGTTAGAGAGCTTGAAAACATTTGGTCCATGATTCCTGAGTCTAATGGCAAAGTAGCTGAATATGTTAGCAGTGATTCAGGAACATTATTCAGTTCACAACCTTCATCATCCATCCCTTTTGCATCCGTAGAAATTTCTGGCAGTGATCTTATTAGTGGAGATATTCCAACCATCAAGCCAAGATAA 2820 0.417 MNLSKCEVVLFLWFCCYLLLATAQNGVTHPNEVKALRAIKNNLIDVNRNLSNWNQGDPCINRWTGVLCHDRRFNDGYFHVRELQLLRMNLSGKLAPEIGNFTYLEILDFMWNKISGTIPKEIGNIITLKLLLLNGNKLIGPLPEELGYLPNLIRMQIDQNNINGSIPSSFANLNACKHFHMNNNSLSGPIPPELSQLPNLFHLLLDTNNLTGTLPPDLSKMPRLKILQLDNNNFSGSTIPESYGDMSRLFKLSLRNCNLKGPIPDLSRIPNLYYIDLSHNQLNETIPTNQLSGNITTIVLSNNNLSGTIPLNFSNLPRLKKLSIANNKLSGNVPSSIWQNKTSSANESLIVDLQNNELNTISGSTTLPSNVTLQLGGNPLCKNNSFAKFCGSQGVTGGNGSSGINCPGEPCSSPYEYSVDCVCSAPLYVDYRLKSPGFGSDFPAFMSNFQTYLTDGLKVETNQLHITDYEWEEGPRLRMNLKVFPATVNNTTTNQKFNDSEYSRIRSTLTGWNISDSDLFGPYELMDLPAYSQVIVVSSGSGLSKGALAGIILGSIAVAVTLSAIVSLLILRIRLRDYRILSKRQHGGTRISIKIEGVRVFVFEELAAATNNFSESSQVGRGGYGKVYKGILADGTAVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSPYSRTPLSFTMRMKIALGSAKGLLYLHTEADPPIFHRDVKASNILLDSKFNAKVADFGLSRLAPVPDVEGVVPGHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEIATGRAPISHGKNIIRQVTSDYQSGGLVAVMDERLGPCPSECVQPFLTLALKCCEDVPDDRPKMAEVVRELENIWSMIPESNGKVAEYVSSDSGTLFSSQPSSSIPFASVEISGSDLISGDIPTIKPR* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0674 939 Pfam Protein kinase domain 614 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0674 939 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Amo17g0674 939 SMART serkin_6 613 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0674 939 ProSiteProfiles Protein kinase domain profile. 613 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0674 939 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 913 - -
Amo17g0674 939 SUPERFAMILY Protein kinase-like (PK-like) 598 904 IPR011009 -
Amo17g0674 939 Gene3D Transferase(Phosphotransferase) domain 1 689 900 - -
Amo17g0674 939 Gene3D Phosphorylase Kinase; domain 1 585 688 - -
Amo17g0674 939 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 7 913 - -
Amo17g0674 939 Gene3D Ribonuclease Inhibitor 293 420 IPR032675 -
Amo17g0674 939 SUPERFAMILY L domain-like 44 390 - -
Amo17g0674 939 Gene3D Ribonuclease Inhibitor 184 292 IPR032675 -
Amo17g0674 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Amo17g0674 939 CDD STKc_IRAK 619 885 - -
Amo17g0674 939 Gene3D Ribonuclease Inhibitor 29 183 IPR032675 -
Amo17g0674 939 ProSitePatterns Protein kinases ATP-binding region signature. 619 641 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0674 Amo-Chr17 14975772 14983133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0674 9 896 Receptor kinase-like Gene Family AT5G01950 56.575 0.0 964
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Amo17g0674 Pkinase 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0674 - - gmx:100786467 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0046 11 615160 621953 Amo17g0674 17 14975772 14983133 PCT