Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0662 ATGGAATTCCAAGGTGGAGAACAATCTAATAATGCCAAACTTGTTAAAGCTCAAAGCCAWATTTGGAATCATACTTTCAGTTTCATAAACTCTATGTCACTGAAATGTGCTGTTGAATTAGGCATACCCGATGCAATACACAATTACGGCAAACCCATGCCCCTCTCACAACTCATTGCTTCATTGCCAATTCATCCGTCAAAAACCTCCTTCATCCATCGCTTGATGAGAATCTTGATCCATTCCGGCATKTTCGTTACCGAAGATGTCACCAATAASAATAACGAGGTTGAAATTGGGTATGTTCTYACTGATTCATGRATTTTCCTACTTAAGAACAACCCCTTCAGTGTGACAACTTTGATTCTGATGAACCTTGGTCCCACCGGGACAAAGGCATGGCATCATTTGTCTGATTGGTTCAAGAACGACGATCTCACAWCATTTGAGACTGCACATGGAATYACGTTRTGGGAGTATATTGACCGCGAGCCTGAATATCGCAAATCCTTCATTGACGGCATGGCAAGTGATGCTCGAGTTGTTAGTAGTCTGTTACTMGATGATAAGTGWAAGGGAGTGTTTGAGGGATTGGAATCGWTGGTTGATGTTGGTGGAGGCACTGGAACTGTTGCAAAGGCCATCGCCGAATCATTCCCAAACTTGAAGTGCTCTGTATTTGATCTCCCATGTGTTGTTGKRGGTTTGCAAGGAACTGACAACCTTAAATACATTGCAGGCGACATGTTTGTTGATCCTATTCCTCCTTCTCATGCAATTTTGTTGAAGTTGATTTTACATGACTGGAACGACGAGGAATGTGTGAAAATATTAAAGAGATGCAAGGAGGCAATCATGCACGAAGACAAAGGAGGGAAGGTCGTTATTATAGACATGGTGGTGGAGGATGATAACAAGAAAGATTATGACCGATCACTTGAAAGTCAGCTCTTCTCTGACATGCTTATGATGGTGTTGTTCSKTGGAAAAGAGAGAAATAYAATAGAATGGACTAACSTAATTTTTTCTGCTGGTTTTACTCGCTATAAAATAACTCCGATTCATGGATTAATGTCTCTCATTGAGATCTATCCATAG 1098 0.4035 MEFQGGEQSNNAKLVKAQSXIWNHTFSFINSMSLKCAVELGIPDAIHNYGKPMPLSQLIASLPIHPSKTSFIHRLMRILIHSGXFVTEDVTNXNNEVEIGYVLTDSXIFLLKNNPFSVTTLILMNLGPTGTKAWHHLSDWFKNDDLTXFETAHGITLWEYIDREPEYRKSFIDGMASDARVVSSLLLDDKXKGVFEGLESXVDVGGGTGTVAKAIAESFPNLKCSVFDLPCVVXGLQGTDNLKYIAGDMFVDPIPPSHAILLKLILHDWNDEECVKILKRCKEAIMHEDKGGKVVIIDMVVEDDNKKDYDRSLESQLFSDMLMMVLFXGKERNXIEWTNXIFSAGFTRYKITPIHGLMSLIEIYP* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0662 365 PIRSF O-mtase 2 365 IPR016461 GO:0008168
Amo17g0662 365 Pfam O-methyltransferase domain 134 346 IPR001077 GO:0008171
Amo17g0662 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 363 IPR029063 -
Amo17g0662 365 SUPERFAMILY "Winged helix" DNA-binding domain 12 115 IPR036390 -
Amo17g0662 365 PANTHER O-METHYLTRANSFERASE 8 365 IPR016461 GO:0008168
Amo17g0662 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 365 IPR016461 GO:0008168
Amo17g0662 365 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
Amo17g0662 365 Gene3D Vaccinia Virus protein VP39 111 365 IPR029063 -
Amo17g0662 365 PANTHER ORCINOL O-METHYLTRANSFERASE 8 365 - -
Amo17g0662 365 Gene3D - 5 110 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0662 Amo-Chr17 14567092 14569000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0662 32 363 Monolignol Biosynthesis Gene Families AT5G54160 31.940 1.03e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0662 - K16040 aip:107609507 466.848