Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0615 ATGACATATGAGATACAAGGTTTGAATGAAAAAGAGTCCTTAAATTTGCTTAATTGGAAAGCTTTTAAAACAAATATTGTTAACTCAAGGTACACAAATATTTTAACCCGTGCAGTAACTTATGCTTTTGGACTTCCATTGGCTTTGGAGATAAGCTTTGATGTTTTGGGAAAAGAAGAGCAGAATGTTTTTCTAGATATTGCTTATTGTTTTAAAGGATATACATTAATGAAAGTTACAAATATACTTCAAGTTTATTATAGGAGGTGTATAAAATATCATATTGGAGTGTTAGTTGAAAATTCTCTCATAAAGATCAATTGGTGTGATAATAGAGTGACAATGCATGATTTTTACAAAGGACATGAGCAAAGAAATTGTTCTAGAAAAGTCACCAGAAATACCTGA 408 0.299 MTYEIQGLNEKESLNLLNWKAFKTNIVNSRYTNILTRAVTYAFGLPLALEISFDVLGKEEQNVFLDIAYCFKGYTLMKVTNILQVYYRRCIKYHIGVLVENSLIKINWCDNRVTMHDFYKGHEQRNCSRKVTRNT* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0615 135 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 48 120 - -
Amo17g0615 135 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 2 51 - -
Amo17g0615 135 SUPERFAMILY "Winged helix" DNA-binding domain 49 108 IPR036390 -
Amo17g0615 135 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 120 IPR044974 GO:0006952
Amo17g0615 135 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 51 IPR044974 GO:0006952
Amo17g0615 135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 67 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0615 Amo-Chr17 13238415 13238924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0615 3 135 WRKY Transcription Factor Family AT5G45050 30.409 1.41e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0615 - - aip:107644586 146.362