Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0573 ATGACCCCAGCAACAGTAGCAGCAGCTTTACGCTCTTCCCTCTCCACCATCTCCTCCGACAAACCATCACCATCAACATCGACCAACAACCATGTTCTGCTCAAACCCAAGCTAAGCCTCATCCATAACAACAACCACCACCACCCCCCACTAATTAACCCAAAGCTCTCCCTCCAATTCAAAGAGAAGATCCTCTGCCTTGAGATAATGGGCATTGATGCAGGGAAAGCACTCTCCCAGAACCCTAACCTCCGTACAGCCACCATGGAATCCATTCAGTCCATAATCTCCTTCCTTCAATCCAAAGGCATCCACCAAAAAGACTTGCAAAGAATCTTTGGCATGTGTCCCAAGATCCTCACCTCTGACATCAAGAAAGATCTCAACCCAGTCTTTGATTTCCTCTTACAAGACCTCAGAGTCCCGGATCACAGCTTCAGGAGAATTGTCAACAAGAACCCAAGGTTGCTTACCTCAAGTGTTATGGAACAGCTCAAACCAGCACTGTTCTACCTCAAGAGGCTTGGCTTCAGGGACATGGCAGCCTTGGCTTTTCAAGATTCTGTTCTTTTGGTTTCCAATGTGGAGAGGACACTAATTCCTAAGCTCAAGTATTTGGAGAGTTTGGGGTTTTCAAAAGATGAGGCTAGAAACATGGTTTTGAGGTGTCCAGCGTTGTTTACTTTCAGTATTGAGAATAACTTTCGGCCAAAGTTTGAGTACTTTGCTACACAAATGAGTAGGGAATTAAAGGAATTGAAAGAGTTTCCTCATTACTTTGGGTTTAGTTTGGAGAATAGAATAAAGCCTAGGCACATGGAAGCTGTAAAAGCTGGGGTTAATTTGCCTTTGTCAGTTATGCTTAAAAGCACTGATGAAGAATTTAGGGAGCTAACAGGTCAGAATATGAGATGA 915 0.4415 MTPATVAAALRSSLSTISSDKPSPSTSTNNHVLLKPKLSLIHNNNHHHPPLINPKLSLQFKEKILCLEIMGIDAGKALSQNPNLRTATMESIQSIISFLQSKGIHQKDLQRIFGMCPKILTSDIKKDLNPVFDFLLQDLRVPDHSFRRIVNKNPRLLTSSVMEQLKPALFYLKRLGFRDMAALAFQDSVLLVSNVERTLIPKLKYLESLGFSKDEARNMVLRCPALFTFSIENNFRPKFEYFATQMSRELKELKEFPHYFGFSLENRIKPRHMEAVKAGVNLPLSVMLKSTDEEFRELTGQNMR* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0573 304 Pfam mTERF 62 178 IPR003690 GO:0003690|GO:0006355
Amo17g0573 304 Pfam mTERF 191 295 IPR003690 GO:0003690|GO:0006355
Amo17g0573 304 Gene3D Transcription termination factor 3, mitochondrial 128 301 IPR038538 -
Amo17g0573 304 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 14 299 - -
Amo17g0573 304 PANTHER CGI-12 PROTEIN-RELATED 14 299 IPR003690 GO:0003690|GO:0006355
Amo17g0573 304 SMART mt_12 250 281 IPR003690 GO:0003690|GO:0006355
Amo17g0573 304 SMART mt_12 75 105 IPR003690 GO:0003690|GO:0006355
Amo17g0573 304 SMART mt_12 181 212 IPR003690 GO:0003690|GO:0006355
Amo17g0573 304 SMART mt_12 147 178 IPR003690 GO:0003690|GO:0006355
Amo17g0573 304 SMART mt_12 110 142 IPR003690 GO:0003690|GO:0006355
Amo17g0573 304 SMART mt_12 217 249 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0573 Amo-Chr17 11859076 11859990 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo17g0573 mTERF 9.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0573 K15032 - gmx:100788221 419.853