Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0553 ATGGAGGGGCTGCCACTATTATCAACTATGAGCACCGTGATCGGTGTGGGGCTACTGATATGGTGGTTGTGGAGTGCACTCAAGTGGGTGTGGCTGAAACCAAAGAGCATAGAGAGGCGTCTAAGGCAGCAGGGCATTAAGGGAAATTCATACCGACCTTTGGTTGGAGACATTAGAGATATGATTAAAATGATTAAACAAGTTAAATCCAAACCCATGGATCCTCATTCCAACGAGATTGCTCCTCGAGTTTTGCCCTATGTTGTCCACACCATTGCTAAATACGGGAAGAGTTCATTTATGTGGCTTGGTCCAACACCAAGGCTATTCATCTTGGATCCAGACAAAATAAAGGAAATGACCAACAAAGTGTATGAATTTCAAAAGCCTGATACAAGTCCACTTTTCAAGCTTCTTGCATCAGGTTTTGCAAATTATGATGGTGATAAGTGGGCTAAACACAGGAAGATCGTAAGTCCAGCATTCAATGTTGAGAAATTGAAGGTCTTGGTACCAATATTTGTTGAGTGTTGCGATGACATGGTAAGCAAATGGGAGAATGTATTAGCTTCTTCTGATGGACCATGTGAGATGGATGTATGGCCTTCCATAACAAACGTGTCGAGCGATGTCCTCGCTCGCGCCGGCTTTGGAAGTAGCTTCGAAGAAGGAAAGAGAGTCTTCCAACTTCAAAGAGAGATGCTTCAACTCACAATGACACTCTTTAAATTCGCTTTCCTTCCAGGGTACAGATTTCTACCAACTCGTACCAACCGAAGGATGAAAGCTATTGACAAGGAAATACGAGGATCGCTAATGAATATCATCAACCGAAGATTGAAATTAATAAAAGCAGGGGAGGCCACAAACAATGACTTGTTGGGGATACTTTTGGAATCAAATTACAAGGAATCTGAGAAAAATAACGGCCCAGGAATGAGTTTAAGAGAGGTAGTGGAAGAGGTCAAACTGTTTTACTTAGCTGGACAGGAAGCCAATGCAGAATTGCTAGTGTGGACCATGTTACTGCTAAGCAAGCATCCTGATTGGCAAGAAAAGGCAAGGGAGGAAGTTTTTAAAGTGTTTGGAAACGAAAAACCAGACTACGACAAGATAGGTCAACTAAAGATTGTGTCAATGATTCTACAGGAGAGCCTTAGGCTATATCCACCGGTGGTCATGTTCGCGCGATTTCTACGCAAAGATGCAAAACTTGGAGACCTCATAATTCCTGCAGGGGTGGAACTTGTAGTGCCTATATCAATGCTACACCAGGAAAAGGAATTTTGGGGAGATGATGCCAAGGAGTTCAAGCCAGAGAGGTTTGCTGAAGGAGTATCAAAGGCAACAAATGGGAAAGTTTCATACATGCCATTTGGATGGGGTCCTCGACTCTGCATAGGGCAAAACTTTGGATTGTTAGAGGCAAAGATAGCTGTGTCCATGATCTTGCAACGTTTCTCCTTTACGTTGTCTCCATCTTATACTCATTCTCCATCCTTTATTATTACACTTCAGCCTGAGCACGGGGCACATTTAATATTACAAAAGTTGTAA 1557 0.4271 MEGLPLLSTMSTVIGVGLLIWWLWSALKWVWLKPKSIERRLRQQGIKGNSYRPLVGDIRDMIKMIKQVKSKPMDPHSNEIAPRVLPYVVHTIAKYGKSSFMWLGPTPRLFILDPDKIKEMTNKVYEFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKLKVLVPIFVECCDDMVSKWENVLASSDGPCEMDVWPSITNVSSDVLARAGFGSSFEEGKRVFQLQREMLQLTMTLFKFAFLPGYRFLPTRTNRRMKAIDKEIRGSLMNIINRRLKLIKAGEATNNDLLGILLESNYKESEKNNGPGMSLREVVEEVKLFYLAGQEANAELLVWTMLLLSKHPDWQEKAREEVFKVFGNEKPDYDKIGQLKIVSMILQESLRLYPPVVMFARFLRKDAKLGDLIIPAGVELVVPISMLHQEKEFWGDDAKEFKPERFAEGVSKATNGKVSYMPFGWGPRLCIGQNFGLLEAKIAVSMILQRFSFTLSPSYTHSPSFIITLQPEHGAHLILQKL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0553 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0553 518 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0553 518 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0553 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0553 518 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0553 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Amo17g0553 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 516 - -
Amo17g0553 518 SUPERFAMILY Cytochrome P450 83 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0553 518 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 10 516 - -
Amo17g0553 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0553 518 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0553 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0553 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0553 518 Gene3D Cytochrome P450 30 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0553 518 Pfam Cytochrome P450 93 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0553 Amo-Chr17 11534976 11538975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0553 7 518 Cytochrome P450 AT3G14690 51.751 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0553 - K24179 gmx:100801959 898.656