Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0496 ATGATAACCGACGATAATATATTCGCGGGTTCTTCATCCTATGAACCATTTTCAATGTCCGGTGGTAATTGCATGGACGAATTGCTAGCAGCTATAGGCTACAAGAAGGTGCGATCAAAGGACAACATGGCTGACGTGGGCCAGAAGCTGGACCAGCAGCTCGAAAAGGTGATGATGGATAATAATGTCAATGCACGCGAAGACGGTACCTCTTCCAACGTCGCTTCAGACGACGCCGTCGTTCACTATGATGACCCCAACGATGTCTTCCCCTGGGAAAAAACCATGCTCACCCCCACGACCACCCACAACAATAACCAAAACGACACCACAATCACCAATTCACTGCCGTTTACGCAAATCCTGGAGGACCCTTTACAGTTCAACATTCTCAACGGAAACTCAGCCAACTACAACGACCTTAGAGCGGTTACCGAAACCGTAAAATCGCAAGTGGAGCCACACTCAGACCTCACGTGCCATTGTGTGGCGGTCGAGGACACTGGCGTGCGTCTCGTTCACGCGCTCATGGCCTGCGCGCAGGCGATCCAGGAAGAGAAGCTTGACCTCGCTGACGTGCTCGTGAACCACGCGTCGGTCCTCGCGTCGCAGCAGGGCGGTGCGATGAGGAAAGTCGCCGCCAACTTTTCTCACGCGTTGGCGCGTCGAATCTACGGCGCGTTCCCGGAGGAGTCCATGAGCCCCTCGCTCTCCGACATGCTCCACGTCCACTTCTACGAGACTTGCCCGTACCTCAAATTCGCGCACTTCACCGCCAACCAAGCGATTCTAGAAGCTTTCTCCTCCGCAACCACCGTCCACGTCATCGATTTCGGCCTGAAGCAGGGGCTTCAGTGGCCCGCCCTCATGCAGGCCCTGGCACTCCGTCCCGGCGGACCACCATCATTCCGGTTAACCGGAATCGGACCGACATCGCCGGAGGACACCGACACTCTTCAACAAGTCGGTTGGAGGCTTTCGCAGCTTGCGAGAACGATTCAGGTTCGGTTCGAGTTCCGGGGATTCGGCTGTAACAGCCTCTCGGATCTTGATCCAACGGCTCTTGATATCAAACCAGGAGAAGCCGTCGCCGTTAACGCCGTCTTTGAGCTTCACCGTATGCTCGCCAAGCCCGGTTCTCTCGAGAGGGTTTTGAACACAGTAAAAAATATCGAACCGGAGATAGTAACGGTGGTGGAGCAGGAAGCGAACCATAACGGTCCTGTGTTTTTTGAACGGTTCACGGAGGCGATGCATTATTACTCGAGTTTGTTTGATTCGATGGAAGGATCGGTAAATGAGGATGGGACTCTTTCGGAGGTTTACTTAGGGAGGCAGATATGCAACGTTGTGGCGTGCGAAGGGGAGGACCGTGTGGAGCGGCATGAAACGCTGGCTCAGTGGAGAGTCAGGATGGGTTCGGCTGGGTTCGAACCAATCCGGCTCGGTTCGAACGCGTTCAGGCAGGCGAGGATGCTGTTGGCTCTGTTCGCCGGAGGAGAAGGGTATAGGGTGGAGGAGAACGACGGGTGTCTGTTGCTCGGTTGGCAAATGAGGCCACTCATTGCTACATCCGCGTGGAGAGTCGCCGGCGGCGCCCGCCGCCATTGA 1611 0.5549 MITDDNIFAGSSSYEPFSMSGGNCMDELLAAIGYKKVRSKDNMADVGQKLDQQLEKVMMDNNVNAREDGTSSNVASDDAVVHYDDPNDVFPWEKTMLTPTTTHNNNQNDTTITNSLPFTQILEDPLQFNILNGNSANYNDLRAVTETVKSQVEPHSDLTCHCVAVEDTGVRLVHALMACAQAIQEEKLDLADVLVNHASVLASQQGGAMRKVAANFSHALARRIYGAFPEESMSPSLSDMLHVHFYETCPYLKFAHFTANQAILEAFSSATTVHVIDFGLKQGLQWPALMQALALRPGGPPSFRLTGIGPTSPEDTDTLQQVGWRLSQLARTIQVRFEFRGFGCNSLSDLDPTALDIKPGEAVAVNAVFELHRMLAKPGSLERVLNTVKNIEPEIVTVVEQEANHNGPVFFERFTEAMHYYSSLFDSMEGSVNEDGTLSEVYLGRQICNVVACEGEDRVERHETLAQWRVRMGSAGFEPIRLGSNAFRQARMLLALFAGGEGYRVEENDGCLLLGWQMRPLIATSAWRVAGGARRH* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0496 536 Gene3D - 24 99 IPR038088 -
Amo17g0496 536 Pfam Transcriptional regulator DELLA protein N terminal 26 98 IPR021914 -
Amo17g0496 536 Pfam GRAS domain family 172 528 IPR005202 -
Amo17g0496 536 SMART DELLA_2 26 110 - -
Amo17g0496 536 ProSiteProfiles GRAS family profile. 163 528 IPR005202 -
Amo17g0496 536 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 528 IPR005202 -
Amo17g0496 536 PANTHER DELLA PROTEIN RGL1 25 528 IPR030006 GO:0003712|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0496 Amo-Chr17 9671474 9673335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0496 25 529 GRAS Transcription Factor Family AT1G66350 55.469 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo17g0496 GRAS 2.1e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0496 K14494 - gmx:100799695 610.527