Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0484 ATGATGGGGTTCTCCCAAGGAATCTCCACTGATACAAGGGACCAAGATTCTCACTTCAAGAACCTCAAAGACAGAAACTTTTTGGGAAAACTGATATGGGACTTTGCATTTGCATGTGTTGCTTCGCCATGCACTTGTAGCAGTGGAAAAATCGATGGCAAAGAATTCAAAAACATAACTTTGGATCACAAGAAGGCTCTGTTGCTGGCAGAATCTAATGGGGTTGGAGCAGAATTGCTGAACAATGAACCTCAATCGGTTCATTCATCTTTCAGGTTCAGCTTCCGTTCTCAGGTTGAGCTAGAATCCTTCAACATGAGTTCTTCTGCTGCTGCTGCTAAGGCAGCCTTGTTGATGGTGAATTTGGAGTGTGAGTCTCTGAAATGGAGGACAATGGAGCCATTGGAGAAGAGCATATCCCCAGTGCCCAACACTTTGATCAGGTTCAATTATCATGAAATTGTGCATGCTACTCGCAATTTCTCCAAAGGTAGAGTGTTGGGAAGAGGGGCATTGAGCTGTGTTTTTAGGGGTAAAGTTGGTATATTGAGGACAACTGTTGCAATCAAAAGGTTGGACAAAGAAGACAAAGAGTGTGCCAAGGCCTTTTGCAGAGAGTTGATGATTGCAAGTTCTCTTCACAACACAAACATTGTACCTCTTTTGGGATTTTGCATTGATTCAGAGGAAGGCTTGTTTTTGGTCTACAAATTTGTTTCAGGAGGAAGCTTAGAACATCACTTGCATGGTAGTGGGAGGAAGAAAAGTAGAGGTTCACCACTTCCATGGTCTGTGAGATTTAAAGTTGCAATTGGGATTGCAAAGGCCATAGCTTATTTGCATTATGGAACTGAAAGATGTGTTGTTCATAGAGATATTAAGCCTTCAAACATTTTGCTTTCCTCTAAGAAAATTCCCAAGTTATGTGATTTTGGACTAGCTACATGGACTGTTGCACCTTCAGTACCTTTTCTATGCAAAGCTGCCAAAGGAACATTTGGTTATTTGGCCCCTGAATATTTTCAACATGGAAAGGTGTCAGATAAGACTGATGTTTATGCTTTTGGAGTGGTTTTATTAGAACTCATAACTGGCAGGAAGCCAATTGAAGCAAAGAGGACTCAAGGAGAAGAGAACTTGGTCTCATGGGCTAAAGCTTTGCTACAGAAAGGGAAATTAGCTATTGAAAAGTTGGTTGATCCTCAACTCCARTATAGCAYTTCGAGATTCTCGAGTCAAATAGCTCGGATGATCGAAGCGGCGGCTGCTTGTATTACATTCGAAGAATCTAGAAGGCCCGGCATATACGAGATTCTTGCYATACTAAAAGGTGAACAAGAACTTGTTCTCTCCAGGAGGAGGAAGTCTGGTTACTACACACAGTTACAACAAAATAATAGTGATTTGAAAAGTCACTTGGCTTTGGCAATGCTTGGAGTATCAGAGTTTGATGATGATGATGATGATTATCTTTCTTGCCGCTAA 1485 0.4128 MMGFSQGISTDTRDQDSHFKNLKDRNFLGKLIWDFAFACVASPCTCSSGKIDGKEFKNITLDHKKALLLAESNGVGAELLNNEPQSVHSSFRFSFRSQVELESFNMSSSAAAAKAALLMVNLECESLKWRTMEPLEKSISPVPNTLIRFNYHEIVHATRNFSKGRVLGRGALSCVFRGKVGILRTTVAIKRLDKEDKECAKAFCRELMIASSLHNTNIVPLLGFCIDSEEGLFLVYKFVSGGSLEHHLHGSGRKKSRGSPLPWSVRFKVAIGIAKAIAYLHYGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTVAPSVPFLCKAAKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRTQGEENLVSWAKALLQKGKLAIEKLVDPQLQYSXSRFSSQIARMIEAAAACITFEESRRPGIYEILAILKGEQELVLSRRRKSGYYTQLQQNNSDLKSHLALAMLGVSEFDDDDDDYLSCR* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0484 494 Gene3D Transferase(Phosphotransferase) domain 1 239 463 - -
Amo17g0484 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Amo17g0484 494 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 11 490 - -
Amo17g0484 494 Gene3D Phosphorylase Kinase; domain 1 146 238 - -
Amo17g0484 494 SMART serkin_6 161 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0484 494 PANTHER OS01G0750732 PROTEIN 11 490 - -
Amo17g0484 494 ProSiteProfiles Protein kinase domain profile. 161 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0484 494 Pfam Protein kinase domain 162 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0484 494 SUPERFAMILY Protein kinase-like (PK-like) 141 442 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0484 Amo-Chr17 9467040 9469367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0484 149 470 Trihelix Transcription Factor Family AT1G70460 40.785 1.07e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo17g0484 Pkinase 4.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0484 - - adu:107481060 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0484 17 9467040 9469367 Amo17g0484 17 9467040 9469367 ECH