Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0461 ATGGAAACGCATAAAGCCAAACTACGCTGCCAATGGTTACAATGCAAACCACGATCTTCATCCAACAAGAGGAATTCTGATGATTCTACAGTTGAGGTGCCCTTCTCAAGCAAGAGGAAGGCAAGAACGGCAGCAAACGCCTTTGGTTACTGTCTTGAAGGGGCTAACGAGGAGGAGGACAAGAGGATGATTATCAAGGAAACAAAAACAGACTGTTCTATTCAAAATAAACAGTTTGATTTCAACGATAATGAACTTGAAGTTGTTAATATTCTGTTTAACCTCCCCGGGAACTTCTTAGAGAGAGTTAATTTAGAGACTTCAAGTAGTGCTGCAAATTCAAGCCCCAGTGCCGACCAAGAACAGGTTTCAAAGGAGTCTTCCAAGAAACCAGTCAACCAAGAAAGAAACAGCCCCAGTGCCGATCAAGAACGGGTTTCGAACAAGAATTCCAAGAAGACCGTTAGCTCAATGGATTCTTGGTCCAAGAGAGAATCAAAGAAACCAGTCAACCAAAACCAAGAACCCTCTGAACTGCCACAAAATTTCAAGAACTTGATAAGTGATATGGGTGGCAGCAGGATCACTCTGCTCATTCAAAAAACTCTATATCTTTCTGATTTGAATCCGCAACAAAACCGGCTTTCGATACCGTCACAGCAGGTCAAGGACAAAGATTTCTTGCTTCCCACGGAACTAGAAATTCTGGAGGAGAAAAAGGGAATAAAGGTGAAATTGATCCAACCCTCGCTGGAAATCACTGAGTTGACTTTGATTAAGTGGTTCATGCACAAGGGACCAGAGTCAGAGAAAGTTAGCATATCCTATATTCTGAGATCAAATTGGGTCAAAGTTGCAGAGGCTAACAATTTAGAAAAGGATGATGTTGTTCAAGTTTGGTCATTCCGAGTTGACGAGAAATTATGCATGGCAATTGTCAAGCTTTGGTTTATTGTTTAA 960 0.4146 METHKAKLRCQWLQCKPRSSSNKRNSDDSTVEVPFSSKRKARTAANAFGYCLEGANEEEDKRMIIKETKTDCSIQNKQFDFNDNELEVVNILFNLPGNFLERVNLETSSSAANSSPSADQEQVSKESSKKPVNQERNSPSADQERVSNKNSKKTVSSMDSWSKRESKKPVNQNQEPSELPQNFKNLISDMGGSRITLLIQKTLYLSDLNPQQNRLSIPSQQVKDKDFLLPTELEILEEKKGIKVKLIQPSLEITELTLIKWFMHKGPESEKVSISYILRSNWVKVAEANNLEKDDVVQVWSFRVDEKLCMAIVKLWFIV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0461 319 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 50 315 IPR005508 GO:0003677
Amo17g0461 319 Gene3D - 195 315 IPR015300 -
Amo17g0461 319 SUPERFAMILY DNA-binding pseudobarrel domain 197 311 IPR015300 -
Amo17g0461 319 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 50 315 - -
Amo17g0461 319 MobiDBLite consensus disorder prediction 133 157 - -
Amo17g0461 319 Pfam B3 domain-containing protein At2g31720-like 184 287 IPR005508 GO:0003677
Amo17g0461 319 MobiDBLite consensus disorder prediction 109 185 - -
Amo17g0461 319 CDD B3_DNA 198 314 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0461 Amo-Chr17 9015165 9016124 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0461 183 312 B3 DNA Binding Superfamily AT1G05930 27.737 1.65e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0461 - - aip:110269262 470.314