Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0454 GTGGACGTCGTGCGCTGCTCGCCTCTCGCCGTTTCTGCTTCTCCTCCTTACTCGATCGCCGGTCGTCGCTGCTCCTCGCCGGTAGCTGCTGCTCCTCGCCGGTCGCCGCTGCTTCCGATTGGGTTTGCTGTCTTCTTGGTCTACTTGGCAATCATTTCTATCACTGGAACTGGGATTAACCCAACTAAGAGCCTTGGTGCTGCCATCATCTTCAACAGAGACCATGCATGGAATGATCATTGGATTTTCTGGGTAGGGCCTTTCATTGGAGCTACTCTTGCTGCCGTGTACCACCAGACAGATAGTCATCCGATTTTGCTTCTGTTTATGCTTCTGATTACATTGATTTTTCTTCTGATTATATTGGGCCTTTCTTTGTGTTTTTGCTTCTATTTATGA 399 0.4912 VDVVRCSPLAVSASPPYSIAGRRCSSPVAAAPRRSPLLPIGFAVFLVYLAIISITGTGINPTKSLGAAIIFNRDHAWNDHWIFWVGPFIGATLAAVYHQTDSHPILLLFMLLITLIFLLIILGLSLCFCFYL* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0454 132 Pfam Major intrinsic protein 38 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo17g0454 132 SUPERFAMILY Aquaporin-like 36 99 IPR023271 -
Amo17g0454 132 PRINTS Major intrinsic protein family signature 81 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo17g0454 132 PRINTS Major intrinsic protein family signature 41 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo17g0454 132 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 36 100 IPR034294 -
Amo17g0454 132 PANTHER AQUAPORIN PIP1-2-RELATED 36 100 - -
Amo17g0454 132 Gene3D Glycerol uptake facilitator protein. 18 106 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0454 Amo-Chr17 8695557 8696031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0454 38 99 Major Intrinsic Protein MIP AT1G01620 83.871 2.27e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0454 K09872 - han:110930503 120.938