Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0426 ATGAAATGGAGTGTCGTCGATTATTTATTTGATAAAAGAGGGTTACGTATATTTTCCTATGGATTGGATTCCGACGATACAAGCCCTAACCCTGCTGCCGCCGTCGCAAGTAAATGTCCAACAACCGAACAGAAGAATACGTGCATGGATTGCAATACTTCCAAGACTCCTATCTGGAGAGGTGGCCCGTTTAGGGCCACCTCTTCAGAGAGAAGTGTTGTTGGAGGTACCACAGTCTGTGCACGTCTTCTTATGCTCGGTTGTTGGACTTTTACCTACGGCTGCGACGGAGCTGGGGCTTGCGTCATCGGAGTCCGATCCCTATATCAGAGCACACAAGTTAAGGTGATCAGATATGAGTAG 363 0.4766 MKWSVVDYLFDKRGLRIFSYGLDSDDTSPNPAAAVASKCPTTEQKNTCMDCNTSKTPIWRGGPFRATSSERSVVGGTTVCARLLMLGCWTFTYGCDGAGACVIGVRSLYQSTQVKVIRYE* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0426 120 Gene3D - 39 84 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0426 Amo-Chr17 8236583 8238492 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0426 42 64 C2C2-Gata Transcription Factor Family AT5G49300 65.217 5.59e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0426 - - pvu:PHAVU_003G110400g 53.9138