Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0390 ATGGTTATACAAGGTGAACCCGGCACTGTCATTCGAGGGAAGAAGGGTCCTGGTGGTGTTACCATTAAGAAGACGAATCAGGCGTTGATCATCGGAATCTACGATGAGCCGATGACTCCAGGGCAGTGCAACATGATTGTTGAAAAGCTGGGTGATTATCTCATTGATACGGTCATGGGATCTGCGTCTAGGGAAGAAGTTACGCGGGTATCTGTATACATTTTACAAGTGGTTTTAATGCTATGGGCATAG 252 0.4603 MVIQGEPGTVIRGKKGPGGVTIKKTNQALIIGIYDEPMTPGQCNMIVEKLGDYLIDTVMGSASREEVTRVSVYILQVVLMLWA* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0390 83 PANTHER PROFILIN-2 1 57 - -
Amo17g0390 83 PANTHER PROFILIN 1 57 IPR005455 GO:0003779
Amo17g0390 83 PRINTS Plant profilin signature 45 58 IPR005455 GO:0003779
Amo17g0390 83 PRINTS Plant profilin signature 12 27 IPR005455 GO:0003779
Amo17g0390 83 PRINTS Plant profilin signature 32 45 IPR005455 GO:0003779
Amo17g0390 83 Pfam Profilin 1 56 IPR005455 GO:0003779
Amo17g0390 83 PRINTS Profilin signature 41 58 IPR005455 GO:0003779
Amo17g0390 83 PRINTS Profilin signature 28 41 IPR005455 GO:0003779
Amo17g0390 83 SUPERFAMILY Profilin (actin-binding protein) 1 56 IPR036140 -
Amo17g0390 83 Gene3D Dynein light chain 2a, cytoplasmic 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0390 Amo-Chr17 7104211 7104915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0390 1 59 Cytoskeleton Gene Families AT2G19760 77.966 5.19e-30 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0390 K05759 - csin:114285323 114.775