Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0366 ATGTGGCCTTGGAGTTCAGAGACCGATAAGATTGCTTTGCTTGTTTTGAAGGACAAGCTTACCAATGGCGATCCTCATGCTATACCATCATGGAATGAGTCTCTACATTTCTGTGAATGGCAGGGCGTTACATGCAGTCGCCGCCACATGAGAGTCTCATCCCTACAACTGCAAAATCAATACTGGGGTGGTATTCTTGCGCCATCCTTAGGAAATCTAACGTTCCTCAAGGAGATCAATTTTACTAACATCAACTTGCATGCTTTTATAAGTATATATCTTTTCAAGAAAAAGGTAAAAAAGTTACCCACTACTTCTCTAGCTTTGCAATATCGCTATGTGAAGGTTTCTTATGGAGAGTTACATCAAGCAACCAATGGATTTTCTTCATCCAATTTAGTTGGCACAGGAAGCTTTGGTTCTGTGTATAGAGGAACCCTTGTGCATTTTGAGAGACCTGTGGCTGTGAAGGTGTTGAAGCTTCAAACAAGCGGGGCATCCAAAAGTTTCATGGTTGAATGCAATGCTCTAGGAAAAATCAAGCACAGAAACCTTGTCAACATATTGACTTGTTGTTCAAGTGTTGACTACAAAGGGAATGATTTCAAGGCTATAGTGTTTGAGTTCATGCCTAATGGGAATCTAGAAGCCTTGTTGCACAACACTATTGAAGATAGCGTGTCCACAAATCTGAGTCTCAACCTAATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTCAGAGAAAGTTGTAGTTCATTGTGATATAAAGCCAAGTAATGTTCTACTTGATGACGAAGTTGTTGCTCATTTGGGAGACTTTGGATTAGCTAGACTCATTCATGGTGCCGCAAGTCGTTCTAGCAGTGGTCAAGCTACTTCCTCTACAATTAAGGGAACCATCGGATATCTTCCACCAGAGTATGGAGCAGGTGGCTCAGTGTCACCGCAAGGAGACATGTATAGCTATGGAATTCTCCTTTTGGAGATGCTCACTGGAAAGAAGCCAACTGATACCATGTTTGGTGAAGGTCTGAGCTTGCACAAAGAAGTTGGTCATTTGAAGAGACTGCAGATTCTTGATTTGAGGCAAAATAATCTTCATGGAGAGATTCCTATAGAGATGATAAATTGTTCAAGCCTTCAAGTAATTATATTGCTATACAATAATCTAACTGGCGAAGTTCCTTCATGGTTTGGTTCTATGATGCAACTTACTCAACTGGGGCTTGGAGCCAACGGGTTTGTTGGTAGTATCCCACCTTCATTGGGAAATCTCTCATCTCTTGAGAAGTTGTCACTTGCATACAATCAATTGGAAGGAAGCATAACTCCAACTTTGGGTAGGTTGTCAACTTTGAAATTTTTGGGTTTGGGTGTAAATAAGTTTTCTGGTCAAGTTCCTCCTTCACTTTACAACCTTTCAAATATTCAAGTTCTTGATTTCACGGAAAACCAGTTAGTGGGTAATTTTCTCTCAAATTTACCTATGGCTTTTCCCAATCTTGAGATACTTTTGTGTGGAGGGAACCGATTCACCGGTACTTTTCCATCTTCAATATCCAACCTTTCTGAACTACAACAGTTTCAAATATCCAAAAATGTTTTTTATGGACCAATTTCTCCTACCGTAGGAAGTTTACACAAACTCCAGATATTTAATGTTGGACGGAATAGATTTGGGAATGGAAGAGCTCATGATTTGGATTTCCTTTCCTCATTGACTAATTGTACTCAATTGCAGAAATTAGGCTTTTATGAAAATTATTTAGGTGGAGTATTTCCAGATATCATAAGCAACTTATCAACAAATCTCGTTTTGCTTGGTATGGCGTTGAATCAAATATCTGGAAGGATACCAGAAGGAATTGGAAAACTAGTCAACCTAGCAACACTTGATATGGAGGGCAATTTTCTTGAGGGAACAATTCCAGATTCAATAGGAAAGCTAAAAAATCTTGGAGTGTTGTGGTTGGATGAAAATAAGTTCTATGGCAACATCCCTCTTGTCATTGGTAACCTTACTATGCTGTCTGACGTTGATCTGAGCTCAAATAAATTTGAAGGACTCATTCCCTTTACACTTGGATACTGCACCAACATGCAAAGATTTTCTGCATATGGAAACAACCTAAGTGGTAATATACCCAATCAAACATTTGGCTACCAGCAAGGTCTAATACAATTGTCTTTATACTCCAACTCTTTTACTGGCTCCATTCCTTCTGATCTTGGAAACTTGAACCATCTTTCCATCTTGCATTTACAAGATAACAAGCTAATTGGTGAGATTCCCGTGAGGCTTAGTGCTTGCACTGCTTTAACGGAGCTGGTACTAGAAAGAAACTCATTCCATGGAAGTATACCTTCATTCTTGGGATCTCTACTATCCCTTGAAATCTTGGACCTTTCTAATAACAACTTCTCAAGCACAATCCCACATGAACTTGTGAATCTCACGTTTCTGAATGCTTTGAACTTATCTTTTAACCATCTCTCTGGTGAGGTCCCGGTAGGAGGGGTATTCAATAATGTCACAGCAATATCACTCGTCGGAAACAAAGATCTTTGTGGTGGAATACCTCAATTGAATCTCCCTACATGCTCTACGTTGCCCTTAAAGAAGAAACACAAGAGATCTGTTAAAAAGAAAGTCATCCTCATAATCGCATTTGGAGGGGTTCTAATCTCTTCCGTTGCCTTTATTATTAGTATATATCTTCTCAAGAAGAAGCAAAAAAGGTTATCCACTCCTTCTCTAGCTTTGCAATATGGCTATGTGAAGGTTTCTTATGGAGAGCTACATCAAGCAACCAATGGATTTTCTTCCTTAAATTTAATTGGCACAGGAAGCTCTGGCTCAGTATATAGAGGAACCCTTCTCCATTTTGAGAGACCTGTTGCTGTGAAGGTGTTGAATCTTCAAACACGCGGAGCATCGAAGAGTTTCGTGTCCGAATGCAAAGCTCTAGGAAAATTGAAGCACAGAAACCTTCTCAATATATTGACCTGTTGTTCAGGTGTTGATTACAAAGGGGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTTTAGAAAGCTTGTTGCACAACAACATTGAAGATAGCGAGTCCACAAATCGGAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTCAGAGGAAGCTGTAGTTCACTGTGATGTTAAGCCAAGTAATGTTCTACTTGATGATGACATTGTTGCTCACCTGGGAGACTTTGGGTTAGCTAGGCTTCTTCATGGGCATGCCACAAGCTATACTAGTAGTAATCAAGCTAGTTCCTCTGTTATTAAGGGAACCATCGGATACCTTCCACCAGAGTATGGAGCAGGTGGGTCAGTATCACCACAAGGAGACATCTATAGCTATGGAATTCTTCTTTTGGAAATACTAACCGGAAAGAGACCAACGGATGGCATGTTTGGTGAAGATTTAAGCCTACACAAATTCTGTAAACTGGCAATTCCAGAAGGAATTACTGAGATTGTTGATTCAAGATTGATAACTCCGTTTGATGAAGGAGAAAGAAGGATCACACAACAGAAAAACATGGAGTGTTTAGTGTCTTTTGCTAGGATTGGAGTTGCATGTTCTGAAGAGTTCCCCACTCAACGGATGAACATTAAAGATGTCATAATGGAGCTGCATGCAATTAAACAGAAACTGCTTCCTTAG 3771 0.3967 MWPWSSETDKIALLVLKDKLTNGDPHAIPSWNESLHFCEWQGVTCSRRHMRVSSLQLQNQYWGGILAPSLGNLTFLKEINFTNINLHAFISIYLFKKKVKKLPTTSLALQYRYVKVSYGELHQATNGFSSSNLVGTGSFGSVYRGTLVHFERPVAVKVLKLQTSGASKSFMVECNALGKIKHRNLVNILTCCSSVDYKGNDFKAIVFEFMPNGNLEALLHNTIEDSVSTNLSLNLMQRVNIALDVAFALDYLHNDSEKVVVHCDIKPSNVLLDDEVVAHLGDFGLARLIHGAASRSSSGQATSSTIKGTIGYLPPEYGAGGSVSPQGDMYSYGILLLEMLTGKKPTDTMFGEGLSLHKEVGHLKRLQILDLRQNNLHGEIPIEMINCSSLQVIILLYNNLTGEVPSWFGSMMQLTQLGLGANGFVGSIPPSLGNLSSLEKLSLAYNQLEGSITPTLGRLSTLKFLGLGVNKFSGQVPPSLYNLSNIQVLDFTENQLVGNFLSNLPMAFPNLEILLCGGNRFTGTFPSSISNLSELQQFQISKNVFYGPISPTVGSLHKLQIFNVGRNRFGNGRAHDLDFLSSLTNCTQLQKLGFYENYLGGVFPDIISNLSTNLVLLGMALNQISGRIPEGIGKLVNLATLDMEGNFLEGTIPDSIGKLKNLGVLWLDENKFYGNIPLVIGNLTMLSDVDLSSNKFEGLIPFTLGYCTNMQRFSAYGNNLSGNIPNQTFGYQQGLIQLSLYSNSFTGSIPSDLGNLNHLSILHLQDNKLIGEIPVRLSACTALTELVLERNSFHGSIPSFLGSLLSLEILDLSNNNFSSTIPHELVNLTFLNALNLSFNHLSGEVPVGGVFNNVTAISLVGNKDLCGGIPQLNLPTCSTLPLKKKHKRSVKKKVILIIAFGGVLISSVAFIISIYLLKKKQKRLSTPSLALQYGYVKVSYGELHQATNGFSSLNLIGTGSSGSVYRGTLLHFERPVAVKVLNLQTRGASKSFVSECKALGKLKHRNLLNILTCCSGVDYKGDDFKAIVFEFMPNGSLESLLHNNIEDSESTNRSLNLMQRVNIALDVAFALDYLHNDSEEAVVHCDVKPSNVLLDDDIVAHLGDFGLARLLHGHATSYTSSNQASSSVIKGTIGYLPPEYGAGGSVSPQGDIYSYGILLLEILTGKRPTDGMFGEDLSLHKFCKLAIPEGITEIVDSRLITPFDEGERRITQQKNMECLVSFARIGVACSEEFPTQRMNIKDVIMELHAIKQKLLP* 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0366 1256 Gene3D Phosphorylase Kinase; domain 1 112 209 - -
Amo17g0366 1256 ProSitePatterns Protein kinases ATP-binding region signature. 956 979 IPR017441 GO:0005524
Amo17g0366 1256 Pfam Protein kinase domain 130 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0366 1256 Pfam Protein kinase domain 952 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0366 1256 Gene3D Ribonuclease Inhibitor 575 885 IPR032675 -
Amo17g0366 1256 SUPERFAMILY L domain-like 6 90 - -
Amo17g0366 1256 ProSitePatterns Protein kinases ATP-binding region signature. 134 157 IPR017441 GO:0005524
Amo17g0366 1256 Gene3D Ribonuclease Inhibitor 400 455 IPR032675 -
Amo17g0366 1256 ProSiteProfiles Protein kinase domain profile. 950 1223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0366 1256 SUPERFAMILY L domain-like 577 858 - -
Amo17g0366 1256 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 88 358 - -
Amo17g0366 1256 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 12 90 - -
Amo17g0366 1256 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 359 1254 - -
Amo17g0366 1256 Pfam Leucine rich repeat N-terminal domain 7 46 IPR013210 -
Amo17g0366 1256 SUPERFAMILY RNI-like 355 668 - -
Amo17g0366 1256 SMART serkin_6 128 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0366 1256 SMART serkin_6 950 1255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0366 1256 ProSiteProfiles Leucine-rich repeat profile. 806 829 IPR001611 GO:0005515
Amo17g0366 1256 Pfam Leucine rich repeat 782 841 IPR001611 GO:0005515
Amo17g0366 1256 SUPERFAMILY Protein kinase-like (PK-like) 931 1247 IPR011009 -
Amo17g0366 1256 Gene3D Ribonuclease Inhibitor 5 111 IPR032675 -
Amo17g0366 1256 Gene3D Transferase(Phosphotransferase) domain 1 210 399 - -
Amo17g0366 1256 Gene3D Transferase(Phosphotransferase) domain 1 1032 1254 - -
Amo17g0366 1256 ProSiteProfiles Protein kinase domain profile. 128 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0366 1256 Gene3D Phosphorylase Kinase; domain 1 911 1031 - -
Amo17g0366 1256 SMART LRR_typ_2 363 387 IPR003591 -
Amo17g0366 1256 SMART LRR_typ_2 683 706 IPR003591 -
Amo17g0366 1256 SMART LRR_typ_2 435 459 IPR003591 -
Amo17g0366 1256 SMART LRR_typ_2 756 780 IPR003591 -
Amo17g0366 1256 SMART LRR_typ_2 635 659 IPR003591 -
Amo17g0366 1256 SMART LRR_typ_2 804 828 IPR003591 -
Amo17g0366 1256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1082 1094 IPR008271 GO:0004672|GO:0006468
Amo17g0366 1256 PANTHER LRR RECEPTOR-LIKE KINASE 88 358 - -
Amo17g0366 1256 PANTHER LRR RECEPTOR-LIKE KINASE 12 90 - -
Amo17g0366 1256 PANTHER LRR RECEPTOR-LIKE KINASE 359 1254 - -
Amo17g0366 1256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Amo17g0366 1256 Gene3D Ribonuclease Inhibitor 456 574 IPR032675 -
Amo17g0366 1256 SUPERFAMILY Protein kinase-like (PK-like) 110 354 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0366 Amo-Chr17 6522665 6535597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0366 674 880 Receptor kinase-like Gene Family AT3G47570 36.364 1.74e-21 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo17g0366 Pkinase 6.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0366 - - ahf:112766919 1429.85