Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0355 ATGTCTGAAGCTTTGATCAATGGCTTGGCTGGTGCTGGTGGAGGGATCATAGCTCAGCTCATCACATACCCTCTTCAAACTGTAAACACTCGTCAGCAAACAGAGCGTGATCCGAAGAAGGATAAGACCAAAAGCATAGGAACRCTCCAGCAAATGTGCCAGGTTGTGAAACATGAGGGGTGGGAGCGGTTGTATGGAGGTTTGATGCCATCTCTAGTGGGTACAGCTGCATCTCAGGGTGTTTATTATTATTTCTATCAAATATTCAGGAACAAAGCCGAAGTGGCTGCACTAGAACAGAAAAGGCTAGGCATTGGCGATGGATCAGTTGGGATGTTCTCCTCACTTATTGTTGCTGCTTTCTCCGGGTGTGTTAATGTGCTATTGACAAATCCCATATGGGTAGTTGTTACACGCATGCAGACGCACAGAAAAGAGTCAAGCAGAACTCCGCCTGGTGATGTGTTGTTAAATGCCACTGAACAAGCATTACTTCCCACAGTTGAGCCTCTTGCTTATGGAACTAGCGATGTGATTCAAGAAGTCTACGGTGAAGCCGGAGTTTGGGGGTTTTGGAAAGGTGTATTACCGACATTGATCATGGTAAGCAACCCTTCTATACAGTTCATGCTCTATGAAACCATGTTGCTGAAGTTAAAAAGAAGACGTAGCCAAAGTAAGAAGGGCAACAATGGAGTATCTGCATTGGAGGTATTTCTTCTTGGAGCTTTGGCTAAGCTTGGAGCTACTATTGTGACATATCCTCTTCTAGTTGTGAAGGTATATCCTAGCTTTTGCTATATATCATGGGAGTATAATCTTAGAAGAATGAAAACAATAACAAGAAATTAA 852 0.4331 MSEALINGLAGAGGGIIAQLITYPLQTVNTRQQTERDPKKDKTKSIGTLQQMCQVVKHEGWERLYGGLMPSLVGTAASQGVYYYFYQIFRNKAEVAALEQKRLGIGDGSVGMFSSLIVAAFSGCVNVLLTNPIWVVVTRMQTHRKESSRTPPGDVLLNATEQALLPTVEPLAYGTSDVIQEVYGEAGVWGFWKGVLPTLIMVSNPSIQFMLYETMLLKLKRRRSQSKKGNNGVSALEVFLLGALAKLGATIVTYPLLVVKVYPSFCYISWEYNLRRMKTITRN* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0355 283 Pfam Mitochondrial carrier protein 6 91 IPR018108 -
Amo17g0355 283 Pfam Mitochondrial carrier protein 110 219 IPR018108 -
Amo17g0355 283 Gene3D Mitochondrial carrier domain 103 279 IPR023395 -
Amo17g0355 283 Gene3D Mitochondrial carrier domain 2 102 IPR023395 -
Amo17g0355 283 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 92 IPR018108 -
Amo17g0355 283 ProSiteProfiles Solute carrier (Solcar) repeat profile. 110 218 IPR018108 -
Amo17g0355 283 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 261 - -
Amo17g0355 283 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 261 IPR044712 GO:0006862|GO:0055085
Amo17g0355 283 SUPERFAMILY Mitochondrial carrier 4 262 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0355 Amo-Chr17 5930361 5934673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0355 24 260 Chloroplast and Mitochondria Gene Families AT1G25380 28.099 8.24e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0355 K13354 - gmx:100775784 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0355 17 5930361 5934673 Amo17g0355 17 5930361 5934673 ECH