Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0351 ATGCCTTCTTCAGCACCCACTTTGGTTTCAAAATGCACCATCTTTCCTGACCAAAAATCCTCGCTCTCAAAACTCAAACTTAGTGTTTCAGACCTTCCTATGTTATCCTGCCACTACATCCAAAAGGGATGCCTCTTCACCCAACCAACTTCCCTCTCTTCTAACCAACTAATTCCACTCTTGAAATCCGCCCTCTCACGAACCCTCTCCCTCTTTCCCCCTCTCGCCGGTCGTTTAACCACTGACTCCCACGGTTATGTCTATATTTCCTGTAACGACGCCGGCGTCCACTTCCTCCACGCCGCCGCACCCGCTCTCAATGTTCTCGATCTTCTTTCCCCRCTTGACGTCCATAAATCTTTCAGAGAATTCTTCACCTTCGATAGAAAGGTTAGTTACAGCGGTCATTACTCCCCGATTATGGCCGTTCAGGTAACCGAGCTCGCCGACGGCTTRTTCATCGGAATTTCCGTCAACCATGCCGTCACTGACGGAACCTCTTTCTGGAACTTCTTCAACACATTCGCTCAGGAATGCAGAGGAGCCAGTAAGAGTATCCGGAATGTTCCTGACTTCCGCCGCGACAGCGTSCTRATCTCCGAWGCCGTCCTCCGATTGCCAGAGGGCGGGCCGAAGGTGACMTTCAACGCCGACGCGCCAATTAGGGAGAGAATCTTCAGCTTCAGCCGCGAAGCAATTCAGAAGCTGAAAGCAAGAGCMAACAACAGAAAATGGACYGAGGGTGRTAACTCCGTTGAGCTGTTACGGAAAAYGAGTAACGACAATCTTCTACAAAAAGATAACGGTAACGGTAAGGTAACGACACTCCTCGAGAATTGGTTCAAGAGCGCGGCTGAAACAGAAACGGTTACAACTGTCGAGATTTCGTCGTTTCAATCCGTATGCGCGCTGCTGTGGCGTGCGGTCACTCGCGCAAGGAAATTGCCGGCTTCWAAAACGACGACGTTTAGAATGGCGGTTAACTGTCGCCACCGGTTAGAGCCGAAATTGGAACCTTTCTACTTCGGAAACGCGATTCAGAGCATTCCGACGTTCGCCACRGCCGCCGACGTGCTCTCWCACGATCTGCGTTGGTGCGCGGAGCAGCTCAACAAGAACGTTAGGGCTCATAACGACGCTACAGTGAGGCAGTTCGTGAAGGATTGGGAATCGAACCCGCGGTGTTTTCCGCTGGGGAATCCCGACGGCGCGTCGATCACGATGGGGAGCTCGCCGAGGTTTCCGATGTACGACAACGACTTCGGTTGGGGAAGGCCGTTGGCGGTGAGGAGCGGTGGCGCGAACAAGTTCGATGGAAAGATTTCYGCGTTTCCGGGAAGAGACGGAAGCGGCACCGTCGATTTGGAGGTGGTTTTGGCTCCGGAGACGATGGCCGGTTTGGAGTCTGATCCTGAGTTTATGARGTACGCTACTGGACAGTTATGA 1446 0.5214 MPSSAPTLVSKCTIFPDQKSSLSKLKLSVSDLPMLSCHYIQKGCLFTQPTSLSSNQLIPLLKSALSRTLSLFPPLAGRLTTDSHGYVYISCNDAGVHFLHAAAPALNVLDLLSPLDVHKSFREFFTFDRKVSYSGHYSPIMAVQVTELADGLFIGISVNHAVTDGTSFWNFFNTFAQECRGASKSIRNVPDFRRDSVLISXAVLRLPEGGPKVTFNADAPIRERIFSFSREAIQKLKARANNRKWTEGXNSVELLRKXSNDNLLQKDNGNGKVTTLLENWFKSAAETETVTTVEISSFQSVCALLWRAVTRARKLPASKTTTFRMAVNCRHRLEPKLEPFYFGNAIQSIPTFATAADVLSHDLRWCAEQLNKNVRAHNDATVRQFVKDWESNPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLESDPEFMXYATGQL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0351 481 Pfam Transferase family 7 474 - -
Amo17g0351 481 Gene3D - 7 203 IPR023213 -
Amo17g0351 481 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 6 476 - -
Amo17g0351 481 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 476 - -
Amo17g0351 481 SUPERFAMILY CoA-dependent acyltransferases 36 183 - -
Amo17g0351 481 Gene3D - 220 471 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0351 Amo-Chr17 5814968 5816722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0351 16 468 Monolignol Biosynthesis Gene Families AT5G48930 28.078 1.68e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0351 - - gmx:100779616 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0351 17 5814968 5816722 Amo17g0351 17 5814968 5816722 ECH