Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0342 ATGCCTTCTTCAGCACCCACTTTGGTTTCAAAATGCACCATCTTTCCTGACCAAAAATCCTCGCTCTCAAAACTCAAACTTAGTGTTTCAGACCTTCCTATGTTATCCTGCCACTACATCCAAAAGGGATGCCTCTTCACCCAACCAACTTCCCTCTCTTCTAACCAACTAATTCCACTCTTGAAATCCGCCCTCTCACGAACCCTCTCCCTCTTTCCCCCTCTCGCCGGTCGTTTAACCACTGACTCCCACGGTTATGTCTATATTTCCTGTAACGACGCCGGCGTCCACTTCCTCCACGCCGCCGCACCCGCTCTCAATGTTCTCGATCTTCTTTCCCCCCTTGACGTCCATAAATCTTTCAGAGAATTCTTCACCTTCGATAGAAAGGTTAGTTACAGCGGTCATTACTCCCCGATTATGGCCGTTCAGGTAACCGAGCTCGCCGACGGCTTTTTCATCGGAATTTCCGTCAACCATGCCGTCACTGACGGAACCTCTTTCTGGAACTTCTTCAACACATTCGCTCAGGAATGCAGAGGAGCCAGTAAGAGTATCCGGAATGTTCCTGACTTCCGCCGCGACAGCGTTCTCATCTCCGAGGCCGTCCTCCGATTGCCAGAGGGCGGGCCGAAGGTGACTTTCAACGCCGACGCGCCAATTAGGGAGAGAATCTTCAGCTTCAGCCGCGAAGCAATTCAGAAGCTGAAAGCAAGAGCGAACAACAGAAAATGGACAGAGGGTGTTAACTCCGTTGAGCTGTTACGGAAAAGGAGTAACGACAATCTTCTACAAAAAGATAACGGTAACGGTAAGGTAACGACACTCCTCGAGAATTGGTTCAAGAGCGCGGCTGAAACAGAAACGGTTACAACTGTCGAGATTTCGTCGTTTCAATCCGTATGCGCGCTGCTGTGGCGTGCGGTCACTCGCGCAAGGAAATTGCCGGCTTCGAAAACGACGACGTTTAGAATGGCGGTTAACTGTCGCCACCGGTTAGAGCCGAAATTGGAACCTTTCTACTTCGGAAACGCGATTCAGAGCATTCCGACGTTCGCCACTGCCGCCGACGTGCTCTCGCACGATCTGCGTTGGTGCGCGGAGCAGCTCAACAAGAACGTTAGGGCTCATAACGACGCTACAGTGAGGCAGTTCGTGAAGGATTGGGAATCGAACCCGCGGTGTTTTCCGCTGGGGAATCCCGACGGCGCGTCGATCACGATGGGGAGCTCGCCAAGGTTTCCGATGTACGACAACGACTTCGGTTGGGGAAGGCCGTTGGCGGTGAGGAGCGGTGGCGCGAACAAGTTCGATGGAAAGATTTCGGCGTTTCCGGGAAGAGACGGAAGCGGCACCGTCGATTTGGAGGTGGTTTTGGCTCCGGAGACGATGGCCGGTTTGCAGTCTGATCCTGAGTTTATGACGTACGCTACTGGACAGTTATGA 1446 0.527 MPSSAPTLVSKCTIFPDQKSSLSKLKLSVSDLPMLSCHYIQKGCLFTQPTSLSSNQLIPLLKSALSRTLSLFPPLAGRLTTDSHGYVYISCNDAGVHFLHAAAPALNVLDLLSPLDVHKSFREFFTFDRKVSYSGHYSPIMAVQVTELADGFFIGISVNHAVTDGTSFWNFFNTFAQECRGASKSIRNVPDFRRDSVLISEAVLRLPEGGPKVTFNADAPIRERIFSFSREAIQKLKARANNRKWTEGVNSVELLRKRSNDNLLQKDNGNGKVTTLLENWFKSAAETETVTTVEISSFQSVCALLWRAVTRARKLPASKTTTFRMAVNCRHRLEPKLEPFYFGNAIQSIPTFATAADVLSHDLRWCAEQLNKNVRAHNDATVRQFVKDWESNPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLQSDPEFMTYATGQL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0342 481 Gene3D - 7 205 IPR023213 -
Amo17g0342 481 Gene3D - 220 471 IPR023213 -
Amo17g0342 481 Pfam Transferase family 7 474 - -
Amo17g0342 481 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 476 - -
Amo17g0342 481 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 6 476 - -
Amo17g0342 481 SUPERFAMILY CoA-dependent acyltransferases 36 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0342 Amo-Chr17 5626365 5628155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0342 16 464 Monolignol Biosynthesis Gene Families AT5G48930 28.105 5.88e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0342 - - gmx:100779616 772.696