Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0312 ATGCTCATATTGTCACCGTCACACTACAACGAAATAATGATGGTGTCTCTCATCATGTTTCTCCTATCTGTCGCTTCACAAACCTTGACTGTGAATGCGGCCTTGAGTTCAGAGACCGATAAAATTGCTTTGCTTGCTTTGAAGGACAAGCTTACCAATGGCTATCCGCATGCTTTGCCATCATGGAATGAGTCTCTCCATTTCTGCGCATGGGAGGGTATTACATGCAGTCGTCGCCACATGAGAGTCTCAGCCTTACAACTTCAAAATCAAGACTGGGGTGGTACTCTTGCGCCATCCTTGGGAAATCTGACGTTCCTAAGGCTGATCAATCTTACCAACATCAACTTGCATGGTGAGATTCCAAGAGAAGTTGGTTATTTAAAGAGGCTGCAGATTCTTGACTTGGGGCACAATAATCTTCATGGTCATATTCCTATGCAGATGATAAATTGTTCAAGCCTTCAAGTATTTCTATTGCGGTTCAATAATCTAACTGGCAAAATTCCTTCATGGTTTGGTTCTATGATGCAACTCACTCAGCTGGCGCTTGCAGTCAACAATTTTGTTGGTAGTATACCACCTTCATTGGGAAATCTCTCATCTCTTGAGAAGTTGTCACTTTCATACAATCATTTGGAAGGAAGCATAACTCCAACTTTGGGTAGGTTGTCAACTTTGAAATTTTTGGGTTTGGGTGTAAATAATTTTTCTGGTCAAGTCCCTCCTTCACTTTACAACCTTTCAAATATTCAACTTCTTGAATTTGTGGACAACCAGTTAGTGGGTACTCTTCTCTCAAATTTACCTATGGCTTTTCCCAATCTTGAGCTACTTATTTGTGGAGGGAACCGATTCACCGGTACTTTTCCATCTTCAATATCCAACCTTTCTGAACTGCAACAATTTGATATCTCAGAAAATGATTTTCATGGACCGATTTCTCCTACCATAGGAAGTTTACGCAAACTCCAGATATTTAATGTTGGACAGAATAGATTCGGGAATGGAAGAGCTCATGATTTGGATTTCCTTTTCTCATTGGCTAATTGTACTCAATTGCAGAGACTAGCCTTTTATGACAATAATTTAGGTGGAGTATTGCCAGATATCATAGGTAACTTATCAACCAATCTCGTTTTGCTTGATATGGGGTTGAATCAAATATCAGGAAGGATATCAGAAGAAATTGGAAAACTAATCAACCTAAGAACACTTGGTATGGATGAAAATTCCTTTGAGGGAACAATTCCAGATTCAATGGGAAAGCTAAAAAATCTGGGAGCGTTGTGGTTGCGTGGAAATAAGTTCTATGGCAACATCCCTCTTGTCATTGGTAACCTTACTATGTTGTCTCAAGTTTATCTCGACTCAAATAAATTTGAAGGATTCATTCCTTTTACACTTGGAAACTGCACCAAGATGGAGAAATTTTACGCTCATGAAAATAACTTAAGAGGTGATATACCCAATCAAACATTCGGCTATCAACAAGGTTTAGTAGAGCTGTCCCTATACTCCAACTCGTTTACTGGCCACATTCCTTCTGAGCTTGGTAACTTGATCCATCTTTCCCTCTTGTATTTGCAAGAAAACATGTTGATTGGTGAGATTCCCATGGAACTTAGTGCTTGCTCTGCTTTAACAGTGCTCGTACTAGAAAGAAACTCGTTCCATGGAAGTGTACCTTCATTCTTGGGATCTCTACTATCCCTTGAAGTCTTGGACCTTTCTAGTAACAATTTTTCAAGCACAATCCCGCATGAACTTGTGAATCTCACGTTGCTGAAGACTTTGAACTTATCTTTCAACCATCTCTATGGTGAAGTCCCGGTAGGAGGAGTATTTTATAATGTCACAGCAATATCACTCGTTGGAAATAAAAATCTTTGCGGTGGGATACCTCAATTGAATCTTTCTGCATGCCCTATGTTGCCCTCACAGAAGAAACACAAGAGATCACTTAAAAAGAGAGTCATCCTCTTCATTGCATTTGGAGGAATTCTAATCTCTTGTGTGGCTTTTATAAGTATATATCTTGTCAAGAAAAAGGCAAAAAAGTTAGCCACTACTTCTCTAGCTTTGCAATATGGTTATGTGAAGGTTTCCTATGGAGAGTTACATCAAGCAACCAATGGATTTTCTTCATCCAATTTAGTTGGCACAGGAAGATTTGGGACTGTGTATAGAGGAATCCTCGTCCATTTTGAGAGACCTGTTGCTGTAAAAGTGTTGAAGCTCCAAACACATGGGGCATCGAAGAGTTTCATGGCCGAATGCAAAGCTTTAGGAAAAATCAAGCACAGAAACCTTGTCAACATATTGACTTGTTGTTCAAGTGTTGATTACAAAGGGGATGATTTCAAGGCCATAGTGTTTGAGTTCATGTCTAATGGGAGTTTAGAAAGCTTGTTGCACAACACCATTGAAGATAGTGAGTCCACAAATCTGAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTTAGAAGAAGCTGTAGTTCATTGTGATATTAAGCCAAGCAATGTTGTTCTTGATGATGAAGTTGTTGCTCACTTGGCAGACTTTGGATTAGCTAGGCTCGTTCATGGTGTTGCAGGCCGTTCTAGCAGTGATAATCAAGCTACTTCCTCTGCAATTAAGGGAACCATTGGATATATTCCACCAGAGTATGGAGCAGGATCTCCAGTATCACCAGAAGGAGATATGTATAGTTATGGAATTCTTCTTTTGGAGATGATCACTGGAAAGAAGCCAACTGATAGCATGTTTGGTGAAGGTCTAAGCCTACCCAATTTCTGTAACATGGTAACTCTAGATGGAATCGCTGAGATTGTTGATTCAAGATTGCTCATTCCAATTGATCAACAAGAAAGAAGAAGGGTTACACAGCAGCAAAATATGGAAGACATCATTCAAGAGTGTCTTGTGTCCTTTGCTAGTATTGGAGTTGCATGTTCTCAAGAGTTTCCAAATCAGCGAATGAGCATAAAAGATGTCATAACTGAATTGCATGCAATCAAACAAAAGCTATCATGCTAA 3081 0.3947 MLILSPSHYNEIMMVSLIMFLLSVASQTLTVNAALSSETDKIALLALKDKLTNGYPHALPSWNESLHFCAWEGITCSRRHMRVSALQLQNQDWGGTLAPSLGNLTFLRLINLTNINLHGEIPREVGYLKRLQILDLGHNNLHGHIPMQMINCSSLQVFLLRFNNLTGKIPSWFGSMMQLTQLALAVNNFVGSIPPSLGNLSSLEKLSLSYNHLEGSITPTLGRLSTLKFLGLGVNNFSGQVPPSLYNLSNIQLLEFVDNQLVGTLLSNLPMAFPNLELLICGGNRFTGTFPSSISNLSELQQFDISENDFHGPISPTIGSLRKLQIFNVGQNRFGNGRAHDLDFLFSLANCTQLQRLAFYDNNLGGVLPDIIGNLSTNLVLLDMGLNQISGRISEEIGKLINLRTLGMDENSFEGTIPDSMGKLKNLGALWLRGNKFYGNIPLVIGNLTMLSQVYLDSNKFEGFIPFTLGNCTKMEKFYAHENNLRGDIPNQTFGYQQGLVELSLYSNSFTGHIPSELGNLIHLSLLYLQENMLIGEIPMELSACSALTVLVLERNSFHGSVPSFLGSLLSLEVLDLSSNNFSSTIPHELVNLTLLKTLNLSFNHLYGEVPVGGVFYNVTAISLVGNKNLCGGIPQLNLSACPMLPSQKKHKRSLKKRVILFIAFGGILISCVAFISIYLVKKKAKKLATTSLALQYGYVKVSYGELHQATNGFSSSNLVGTGRFGTVYRGILVHFERPVAVKVLKLQTHGASKSFMAECKALGKIKHRNLVNILTCCSSVDYKGDDFKAIVFEFMSNGSLESLLHNTIEDSESTNLSLNLMQRVNIALDVAFALDYLHNDLEEAVVHCDIKPSNVVLDDEVVAHLADFGLARLVHGVAGRSSSDNQATSSAIKGTIGYIPPEYGAGSPVSPEGDMYSYGILLLEMITGKKPTDSMFGEGLSLPNFCNMVTLDGIAEIVDSRLLIPIDQQERRRVTQQQNMEDIIQECLVSFASIGVACSQEFPNQRMSIKDVITELHAIKQKLSC* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0312 1026 SUPERFAMILY L domain-like 350 632 - -
Amo17g0312 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Amo17g0312 1026 SMART serkin_6 714 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0312 1026 Gene3D Ribonuclease Inhibitor 203 344 IPR032675 -
Amo17g0312 1026 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Amo17g0312 1026 Gene3D Ribonuclease Inhibitor 36 196 IPR032675 -
Amo17g0312 1026 Gene3D Ribonuclease Inhibitor 345 643 IPR032675 -
Amo17g0312 1026 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Amo17g0312 1026 Gene3D Phosphorylase Kinase; domain 1 675 795 - -
Amo17g0312 1026 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 39 1026 - -
Amo17g0312 1026 Gene3D Transferase(Phosphotransferase) domain 1 796 1025 - -
Amo17g0312 1026 PANTHER LRR RECEPTOR-LIKE KINASE 39 1026 - -
Amo17g0312 1026 SMART LRR_typ_2 128 152 IPR003591 -
Amo17g0312 1026 SMART LRR_typ_2 400 424 IPR003591 -
Amo17g0312 1026 SMART LRR_typ_2 569 592 IPR003591 -
Amo17g0312 1026 SMART LRR_typ_2 200 224 IPR003591 -
Amo17g0312 1026 SMART LRR_typ_2 521 545 IPR003591 -
Amo17g0312 1026 SMART LRR_typ_2 593 618 IPR003591 -
Amo17g0312 1026 Coils Coil 967 987 - -
Amo17g0312 1026 ProSiteProfiles Protein kinase domain profile. 714 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0312 1026 Pfam Protein kinase domain 716 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0312 1026 Pfam Leucine rich repeat 154 213 IPR001611 GO:0005515
Amo17g0312 1026 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Amo17g0312 1026 SUPERFAMILY Protein kinase-like (PK-like) 696 1017 IPR011009 -
Amo17g0312 1026 SUPERFAMILY L domain-like 37 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0312 Amo-Chr17 5008167 5011755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0312 34 1024 Receptor kinase-like Gene Family AT3G47570 43.687 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo17g0312 Pkinase 2.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0312 - - ahf:112766919 1644.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0312 17 5008167 5011755 Amo07g0478 07 5286008 5291196 hybridization