Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0309 ATGCAAAGGGTAAATATTGCTCTTGATTTAGCTTTTGCATTGGATTATCTTCACAATGATTCAGGGGAAGCCATAATTCATTGTGATATTAAGCCTAGCAATGTGCTTCTTGATGATGATATTGTTGCCCACTTAGAAGACTTTGGTCTAGCAAGACTTGTTCAAGGGGACAGAAGCTATTCTACCAGTAATCATGGAAGTTCCTCTACAATTAAGGGAACCATCAGATATGTTCCACCAGAGTATGGAGCAGGTGGACCAGTATCACCACAAGGAGACATCTATAGATATGGAATTCTTCTTTTGGAAATACTAACCGGAAAGAAACCAACAGATGACATGTTTGGTGAAGATCTAAGCCTACACAAGTTTTGTAAAAAGGCAATTCCAGAAAGAATCACTGAGATTGTTGATTCAAGATTGTTAATTCCGTTTGGTGAAGGAGAAAGAAAGATCACGCAAAAGCAAAGTATCAAGGAGTGTATAGTGTCCTTTGCCAGGATTGGAGTTGCATGTTCTCAAGAGTTTCCCACTCGACGGATGAACATTAAAGATGTCGTAATGGAGCTGCATGCAATTAAACGCAAACTGCTTCCATAA 600 0.3917 MQRVNIALDLAFALDYLHNDSGEAIIHCDIKPSNVLLDDDIVAHLEDFGLARLVQGDRSYSTSNHGSSSTIKGTIRYVPPEYGAGGPVSPQGDIYRYGILLLEILTGKKPTDDMFGEDLSLHKFCKKAIPERITEIVDSRLLIPFGEGERKITQKQSIKECIVSFARIGVACSQEFPTRRMNIKDVVMELHAIKRKLLP* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0309 199 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Amo17g0309 199 ProSiteProfiles Protein kinase domain profile. 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0309 199 Gene3D Transferase(Phosphotransferase) domain 1 1 197 - -
Amo17g0309 199 PANTHER LRR RECEPTOR-LIKE KINASE 2 197 - -
Amo17g0309 199 SUPERFAMILY Protein kinase-like (PK-like) 2 190 IPR011009 -
Amo17g0309 199 Pfam Protein kinase domain 5 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0309 199 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0309 Amo-Chr17 4986478 4987324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0309 1 198 Receptor kinase-like Gene Family AT3G47580 45.226 9.29e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo17g0309 Pkinase 1.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0309 - - ahf:112766919 394.045