Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0292 ATGGCTGCTTCTATTATCTTTCTCTTTTTTGCTATCATAACACTCGCCGCCGGGATCCTCCTCCGCCGCAAACACCGCCACCGCAACCACCGCTTACCACCGGGGAGCCTAGGTCTCCCCTTTGTCGGCGAAACCATACAGCTCATCTCCGCCTACAAGAGCGACAATCCCGAACCGTTCATAGACCAGCGAGTGAACCGGTACGGTCCGATCTTCACAACGCACGTGTTCGGCGAACCGACGGTTTTTTCGGCTGACCCGGAAACGAACCGGTTTTTTCTTCTGAACGAAGGGAAACTTTTCGATTGCAGCTACCCCGGTTCGATATCGAATCTCTTGGGGAAACACTCGTTGCTGTTGATGAAAGGTGCACTTCATAAGAGAATGCATTCACTCACTGCTAGCTTCGCTAACTCTTCCATTATCAAGGATCATCTTCTTCTTGATATTGACCGACTTATTCGTCTCAACTTGGATTCCTGGTCCGACCGGGTTCTTCTCATGGAGGAGGCCAAAAAGATAACATTTGAGTTGACAGTGAAGCAGCTTATGAGCTTTGATCCCGGGGAATGGACTGAAAATCTAAGGAAAGAGTATGTTCTTGTGATTGAAGGATTCTTCACTCTCCCTTTCCCTCTCTTCTCTACTACTTACCGCAGAGCCATCAAGGCAAGAAGGAAGGTGGCGGAGGCACTAACGTTGATAGTGAGGGAGAGGAGAAAAGAAAGTGAAACAGAGGAGGGAAAAAAGAATGATATGCTGGGGGCACTGTTGGGCTCCGGCAACCGCTTCTCCGACGAGCAAATAGTGGATTTCATGGTGGCATTGCTTGTCGCCGGCTACGAAACCACCTCCACCATAATGACTCTGGCCGTCAAGTTCCTCACGGAGACTCCTCTAGCCTTAGCACAACTCAAGGAGGAACATGATCAAATTCGGTCAAAGAAGAGTAACTCAGAGGCACCATTGGAGTGGTCAGATTATAAGTCAATGGCATTTACCCAATGCGTTGTGAACGAGACTTTGCGTGTGGGAAACATAATTGGTGGGATATTTAGGAGAGCAATGACAGACATTAACATCAAAGGTTACACTATTCCTAAGGGATGGAAGGTCTTTGCATCATTTCGCGCTGTGCATCTAAACCCAGATCATTTCAAAGATGCTCGCACCTTCAATCCATGGAGATGGCAGAGTAACACGGAAGTAACATGCCCTACAAATGTATATACTCCGTTTGGCGGAGGGCCACGGCGGTGCCCTGGCTACGAGCTAGCCAGAGTGCTGCTATCCGTCTTCCTTCATCGCATGGTAACCCAATACAGTTGGTACCCTGCAGAGGAAGATAAGTTGGTGTTTTTTCCAACAACTAGGACACAGAAGAGGTACCCTATCATAGTGAAGCGTAGAGAGGATTACAATAAACTATGTAAAGCACAATGA 1443 0.4809 MAASIIFLFFAIITLAAGILLRRKHRHRNHRLPPGSLGLPFVGETIQLISAYKSDNPEPFIDQRVNRYGPIFTTHVFGEPTVFSADPETNRFFLLNEGKLFDCSYPGSISNLLGKHSLLLMKGALHKRMHSLTASFANSSIIKDHLLLDIDRLIRLNLDSWSDRVLLMEEAKKITFELTVKQLMSFDPGEWTENLRKEYVLVIEGFFTLPFPLFSTTYRRAIKARRKVAEALTLIVRERRKESETEEGKKNDMLGALLGSGNRFSDEQIVDFMVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRSKKSNSEAPLEWSDYKSMAFTQCVVNETLRVGNIIGGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPDHFKDARTFNPWRWQSNTEVTCPTNVYTPFGGGPRRCPGYELARVLLSVFLHRMVTQYSWYPAEEDKLVFFPTTRTQKRYPIIVKRREDYNKLCKAQ* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0292 480 Gene3D Cytochrome P450 21 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 SUPERFAMILY Cytochrome P450 25 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 PANTHER CYTOCHROME P450 90A1 11 469 - -
Amo17g0292 480 Pfam Cytochrome P450 209 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0292 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Amo17g0292 480 PANTHER CYTOCHROME P450 26 11 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0292 Amo-Chr17 4767290 4772891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0292 121 471 Cytochrome P450 AT5G05690 81.481 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0292 K09588 - gmx:100781291 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0292 17 4767290 4772891 Amo17g0292 17 4767290 4772891 ECH
Amo17g0292 17 4767290 4772891 Amo07g0502 07 5683997 5689313 hybridization
Amo10g1071 10 21193602 21201920 Amo17g0292 17 4767290 4772891 PCT
Amo17g0292 17 4767290 4772891 Amo10g1071 10 21193602 21201920 PCT