Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0281 ATGCCATCCTTAGGCTTGATCTCGCCGGTCGTAACTGAACGTGGTTACTCGTTTACCACCTCAGCAGAGCGAGAAATCGTGAGGGATACGGCCAAGACCAGCTCCTCTGCGAAGAGCTATGAATTACCAGATGGACAGGTGATTACCATTGGCGACGAGTGTTTCAGATGTCCTGAGGTGCTTTTCCAACCATCCATGATAGGAATGGAAGCTGCAGGTATCCACGAGCCGACATACAACTCAATCATGAAGTGCGATGTTGATATTAGGAAAGACTTGTATGGAAACATTGTTCTATCAGGAGGAACAACTATGAGCAAGGAAATCTCTGCATTGGCTCCCAGCAGCATGAAGATCAAGCTGGTGGCTCCCTCTAAGAGAAAATATAGTGTCTGGATTGGTGGTTCTATCTTGGCATCCCTCAGCACTTTCCAGCAGATGTGGATTGCAAAGGTGGTGGTTATGCTCATGTTGGGAGTCATGAGGCCAGGAGTTATTGCTTACAAATAA 510 0.4706 MPSLGLISPVVTERGYSFTTSAEREIVRDTAKTSSSAKSYELPDGQVITIGDECFRCPEVLFQPSMIGMEAAGIHEPTYNSIMKCDVDIRKDLYGNIVLSGGTTMSKEISALAPSSMKIKLVAPSKRKYSVWIGGSILASLSTFQQMWIAKVVVMLMLGVMRPGVIAYK* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0281 169 SMART actin_3 1 161 IPR004000 -
Amo17g0281 169 PANTHER ACTIN-7 29 152 - -
Amo17g0281 169 PANTHER ACTIN-7 10 30 - -
Amo17g0281 169 Pfam Actin 28 151 IPR004000 -
Amo17g0281 169 SUPERFAMILY Actin-like ATPase domain 10 151 IPR043129 -
Amo17g0281 169 PANTHER ACTIN 29 152 IPR004000 -
Amo17g0281 169 Gene3D - 30 130 - -
Amo17g0281 169 PANTHER ACTIN 10 30 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0281 Amo-Chr17 4448978 4449793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0281 10 151 Cytoskeleton Gene Families AT3G12110 76.786 1.51e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0281 K10355 - gmx:100781831 242.662