Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0276 ATGGCGGTTTCAAACGGAATAGAAGTAGAAGCCGTTCTCCACTTCCTCAGAAAGAACGGTCTCTCTCAAGCTGAATCCGCACTCAGGCAAGATATCATCGACAAGAACGGAGCTAGTAGTGATGAAAACCTTCTTCGATCCTTCGATTACGAGAAGTTCTTCTTTCCAATGGTTCCTCCTCCGCCACCGCTCAAGCTCCGATCCTTTTCTCTCCTGCCGGAGGATCGTGCCGGTGCCGCCGCCGGAGCTTCCGGAGCCTGCTCTGTTTCCTCCGAGGATGACTTTGTTACTATAGCTTCATCTACTTCTCGTGCTCCTTCTTCAGAATTCATCAATCCATATGGAATTAGTTCCTTGTCTCAAACTCAAAATGATTCTGAATCCTCATCTGATAGAATGTCTCAATTCGGCACAGCGCGTGACTATCATGATTTCGACATGCAAAATGAACCATATTGGTATAATGAAAAGGACGAAGACTATTTCATGACTCCGAATTTCGAAGGGCCTGATTTCTTTGGGAACCAAAGTGAGGATAAGTTTGTCATGACAGCAGAAATGGAAAACCAACATGACAATCCTCTTAGTCTTGCTTTCGACCACAAAAAATTTCAGTTAGAGGGAAATGAATCAAATGATAGTTACATGGACAAGGTATGCCTTTATAATCATTCCTCTGTAAGGGATGGAAATGCGACTTATTCAAAAGGCTATAGTCTAGTGGATGATAACAAGGATTTTGAAGCCGAATCGGAAGGTAAGACCGAGAAACAAATCGTATCCTATGGTTGTGAGGTTCCATTTTGCAAAGGCTGTGATGGTTCAGGAGAGCCTTGTAACGGGGATCCTACGAACTTCAGCTATCCTAGTTTGAAGGAGATTCATTTGAATGATTTTCATTTGAAGGTTGTTGGAGATATTAGCTCTTTTGGTTCAGCTCTTGAGCATGCTGAGAATGGAAGTTTCAACTACTACACTAAAAAGGACAAAAGTAAAGACTATGAGGATCCGTTCGACATAACTATCAAAGTTGCTGAAACAGATCTACCAAAAGGAGTTGACAACCATGAAGCTCGAGATGATGGAGATTTCGCCGAAGAGTGCCAAGATCCAGACATTGCTGCAGATGGAGAGGTTGCTACTGATGATGAGCTCTTAAAGTACACTCAAGAGGATGAATATGAAGTATTTGACCTGAGAATTATACACAGAAAGAACAGGACTGGATTTGAAGAAAATAAGGAGCTCCCAATTGTGCTGAATACAATCATCGCGGGCAGGTACTATATAACGGAGTATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTCCAGGCTCACGATCTTCATACGGGAATAGATGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTGAATAAGCATGATCCAGCAGATCAACGCCACATATTGCGTCTTTACGATTATTTCTACCATCAGGAACATTTGTTCATTGTAACCGAGCTTCTCCGAGCAAACTTATATGAATTTCAAAAATTCAACCAAGAATCTGGAGGAGAAGCATATTTTACATTGAATAGGCTACAGCTCATTACTCGTCAGGTTTTGGAGGCGTTGCACTACTTGCATAACTTGGGAATCATTCACTGTGACCTGAAGCCAGAAAATGTTCTAATAAAAAGTTACAAAAGATGTGAGATAAAGGTTATTGATCTTGGAAGCAGTTGCTTTCAATCCGACAATCTATGCCTATATGTACAATCCCGATCCTATAGAGCTCCTGAAGTTATGTTAGGCCTTCAATATGACGAAAAAATCGACATATGGTCTCTCGGATGCATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAACGATGGAGTTGTGATGATTCTAGCGCGTATGATTGGAATGCTTGGTCCTATTGATCTAGAGCTGTTGGTTAAAGGGCAAGATACACACAAGTACTTCACCAAAGAATATGATATTTATTATGTAAATGAGGAGACTGATCAATTGGAGTACATAATTCCAGAGGAATCATCATTGGAGCAGCACCTACAAGTTTCTGATACAATGTTTATAGACTTTGTAAGATACTTGCTTAGCATCAACCCTAAAAGAAGACCTACTGCTAGACAAGCACTAAAGCATCCGTGGCTTTCCCATGTTTACAAGTCCAAATAG 2214 0.4106 MAVSNGIEVEAVLHFLRKNGLSQAESALRQDIIDKNGASSDENLLRSFDYEKFFFPMVPPPPPLKLRSFSLLPEDRAGAAAGASGACSVSSEDDFVTIASSTSRAPSSEFINPYGISSLSQTQNDSESSSDRMSQFGTARDYHDFDMQNEPYWYNEKDEDYFMTPNFEGPDFFGNQSEDKFVMTAEMENQHDNPLSLAFDHKKFQLEGNESNDSYMDKVCLYNHSSVRDGNATYSKGYSLVDDNKDFEAESEGKTEKQIVSYGCEVPFCKGCDGSGEPCNGDPTNFSYPSLKEIHLNDFHLKVVGDISSFGSALEHAENGSFNYYTKKDKSKDYEDPFDITIKVAETDLPKGVDNHEARDDGDFAEECQDPDIAADGEVATDDELLKYTQEDEYEVFDLRIIHRKNRTGFEENKELPIVLNTIIAGRYYITEYLGSAAFSRVVQAHDLHTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADQRHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLNRLQLITRQVLEALHYLHNLGIIHCDLKPENVLIKSYKRCEIKVIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDGVVMILARMIGMLGPIDLELLVKGQDTHKYFTKEYDIYYVNEETDQLEYIIPEESSLEQHLQVSDTMFIDFVRYLLSINPKRRPTARQALKHPWLSHVYKSK* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0276 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Amo17g0276 737 Pfam Protein kinase domain 430 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0276 737 Gene3D Transferase(Phosphotransferase) domain 1 482 730 - -
Amo17g0276 737 ProSiteProfiles Protein kinase domain profile. 428 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0276 737 MobiDBLite consensus disorder prediction 114 135 - -
Amo17g0276 737 SUPERFAMILY Protein kinase-like (PK-like) 417 734 IPR011009 -
Amo17g0276 737 CDD PKc_DYRK_like 428 730 - -
Amo17g0276 737 Gene3D Phosphorylase Kinase; domain 1 423 509 - -
Amo17g0276 737 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 11 734 - -
Amo17g0276 737 SMART serkin_6 428 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0276 737 PANTHER DUAL SPECIFICITY PROTEIN KINASE 11 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0276 Amo-Chr17 4357134 4362207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0276 425 725 MAP Kinase Gene Family AT5G19010 31.776 1.38e-34 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Amo17g0276 Pkinase 5.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0276 - - adu:107457629 1429.08