Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0269 ATGGCTTCCTTCAATGTATTATTCTTCGTCCTTATTAGCATCCTCAACTTTTCATCAATTACTACAAAAGCAGAGGACACTCATTTTCTCTACCAGGTTTGCTCAAAATACAGATTCACTWCGATCAACACCACCTACCAAAACAACCTCAGGACCCTYCTCTCTTCCTTATCCTCCAAGGCCACCCACAACACCGARTTCTACAACAACACCGTCACCGGAAAAACCCCCGCCGACACAGTCTATGGACTATACATGTGCAGAGGAGACATACCCTCTGAWCTATGCGGCGAGTGCGTGGGAAACGCAAGTCAAAGACTTTCAACAAACACAGAGTGTTCACTCTCCATAGCGGCAGTTATGTGGTACGACGAGTGCATGGTAAGGTACTCRAACACGTCGTTCTTCTCGCGCGTGACGGTGGCGCCTGGCTACCCTGGCTACGCGTTGYCCAGCCCCACCAACATGACAGACCAACAAAGCTTCAACCGTTTATTGTATCGAACCTTGAATCAAACTGCGGACGAAGCGGCCAACGCGCCCATCGGTGCAAAGAAGTTCGCTACAAAGGAAGCTGCKATATCCATATTCCARAATCTTTATTGTCTTGCTCAGTGCACGCCGGATCTGTCGCCGGAAGATTGTAGAAGCTGTTTGGATGGTTTGATCAATTCGAACCTTCCTGAGTGCTGTGCAGGAAAGCAAGGAGGGAGGATTCTGTACCCTAATTGCAATATTCGGTTTGAGATTTACCCTTTCTATCGATCACTTGAATCTGCACCGTCCCCAGCACCATCATCAAATTCCAGAGACAAAAGAAGTCGATCACGAACAATTATCTTAATCGTTGTACCCATTGCTATTGTGGCACTGCTTTTCACTTTGTGCTGCTATATCCTAAGAAGAAGACAAAAAAAGAATTCCAAGACTATTCTTAGAGAAAACTTTGGTCGTGAAAGTGCCACTTTAGAAGGGCTGCAATTCGATTTCTCTATAATTGAAGCAGCCACGAACAACTTTTCTCACCAGAACATGATTGGCAAAGGAGGATTTGGAGAAGTTTACAAGGGTACTCTTCCTGATGGCCGACATGTAGCTATAAAAAGACTTTCTACAAGTTCTAAACAAGGTGTGGTTGAGTTCAAGAATGAAATTTTGCTGATAGCCAAGCTTCAACACAGGAATCTAGTATCTTTTATGGGCTTTTGTATAGAAGAACAAGAGAAAATACTACTTTACGAATACATGGTGGTCAAACAACAAAAGTTAAGCTGGGATCAACGTTATAAAATTATCGGAGGAACTGCTCTTGGAATTCTTTATTTACATGAATATTCAAGACTTAAAGTTATACATCGTGATTTAAAACCGAGTAATATTTTACTGGATAAAAATATGAATGCAAAAATTTCAGATTTTGAATATGCAATGCTTGGACAATTTTCAGAAAAATCAGATGTTTTTAGTTTTGGAGTCATAATTCTAGAAATTGTCTCTACAAAAAATGCAAAATCTTATACTTTCAAATCACCTACAATGGGGACAATAGTTTCATATCTTAATAATCATTCTCTTGATTTGCCATCTCCACAAGAACCAGCATTTTTCTTGCATGGTGGTTTCATGGATCCAAAAACAGTTGCACAAGAATCAAGTTCTAGTCATCAATCTGGCAAAAGTTCAACAACGTTCTTATAA 1698 0.4064 MASFNVLFFVLISILNFSSITTKAEDTHFLYQVCSKYRFTXINTTYQNNLRTLLSSLSSKATHNTEFYNNTVTGKTPADTVYGLYMCRGDIPSXLCGECVGNASQRLSTNTECSLSIAAVMWYDECMVRYSNTSFFSRVTVAPGYPGYALXSPTNMTDQQSFNRLLYRTLNQTADEAANAPIGAKKFATKEAAISIFQNLYCLAQCTPDLSPEDCRSCLDGLINSNLPECCAGKQGGRILYPNCNIRFEIYPFYRSLESAPSPAPSSNSRDKRSRSRTIILIVVPIAIVALLFTLCCYILRRRQKKNSKTILRENFGRESATLEGLQFDFSIIEAATNNFSHQNMIGKGGFGEVYKGTLPDGRHVAIKRLSTSSKQGVVEFKNEILLIAKLQHRNLVSFMGFCIEEQEKILLYEYMVVKQQKLSWDQRYKIIGGTALGILYLHEYSRLKVIHRDLKPSNILLDKNMNAKISDFEYAMLGQFSEKSDVFSFGVIILEIVSTKNAKSYTFKSPTMGTIVSYLNNHSLDLPSPQEPAFFLHGGFMDPKTVAQESSSSHQSGKSSTTFL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0269 565 Gene3D - 25 135 IPR038408 -
Amo17g0269 565 Gene3D - 147 253 IPR038408 -
Amo17g0269 565 ProSiteProfiles Gnk2-homologous domain profile. 27 135 IPR002902 -
Amo17g0269 565 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 474 502 - -
Amo17g0269 565 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 258 - -
Amo17g0269 565 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 268 473 - -
Amo17g0269 565 SUPERFAMILY Protein kinase-like (PK-like) 324 505 IPR011009 -
Amo17g0269 565 SMART serkin_6 340 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0269 565 Pfam Salt stress response/antifungal 154 250 IPR002902 -
Amo17g0269 565 Pfam Salt stress response/antifungal 38 132 IPR002902 -
Amo17g0269 565 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Amo17g0269 565 MobiDBLite consensus disorder prediction 546 565 - -
Amo17g0269 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Amo17g0269 565 Gene3D Transferase(Phosphotransferase) domain 1 414 536 - -
Amo17g0269 565 Gene3D Phosphorylase Kinase; domain 1 300 413 - -
Amo17g0269 565 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 18 258 - -
Amo17g0269 565 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 268 473 - -
Amo17g0269 565 Pfam Protein kinase domain 342 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0269 565 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 474 502 - -
Amo17g0269 565 ProSiteProfiles Protein kinase domain profile. 340 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0269 565 ProSiteProfiles Gnk2-homologous domain profile. 144 253 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0269 Amo-Chr17 4221975 4226084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0269 11 520 Receptor kinase-like Gene Family AT4G05200 40.885 1.77e-136 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo17g0269 Pkinase 7.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0269 - - vun:114191422 686.411