Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0247 ATGGCAACTTCCGTACAAGTAAAACAAGCCCTCGTTATTACTCCCTCCGAGCCCACGCCGGCCCGCGTCCTCGCTCTTTCAGCTATTGACTCCCAACTATTCCTTCGTTTCACCGTAGAGTACCTCTTGGTCTACCGGGCCTGGCACGGGCTTGATCAGGCTGCCACCACAGCCCGTCTAAAATCGGCATTAGCTGAAGCGCTTGTTCCCTACTATCCGTTTGCAGGCAGGATCAGGCCCCGCCCAGATGCCCCGGGCCTTGAGGTGCTCTGCCGGGCCCAGGGTGCAGTGTTCATTGAGGCCTTTTCTGACCGTTACAGTTCCAACGACTTAGAGAAACCGCCGAAAACTGTTGCTCAGTGGAGAAAACTGTTGTCCCTCCACGTGGCAGACGTTCTAAGAGGATCCCCGCCGCTGGTCGTTCAGCTCACGTGGCTCCGCGACGGTGCAGCAGCGATCGCCGTTGGAATCAGTCACTGTATCTCCGACGGAATCGGAAGTGCAGAGTTTCTCAACTACTTCGCGGAGTTAGCTTCTGGGAAACGCGTCGCCGGTTCAAGACCGAAACCTGTTTGGGAGCGTCACCTCCTGAATCCGCCACCACCGGCGGGAAAGAAATGCGTCCGGGTCAACCCGGCGAGTCACCCAGAGTTCAACCGAGTGCCTGACCTCTGTGACTTCATGAACCTGGTCTCTACCGGACTCAAGCCTACCTCCATCACCTTCGATAAAATGAGGCTCGGCGAGTTGAAGAGGCTCGCCCAGTGCACGAGTCAACCCGGCGATGAGTCATCGTCGTTCTACACGTCTTTCGAGGTCCTCGCAGCTCACGTGTGGAGGAGCTGGGCCAGAGCACTGGAATTTCCGCCAAATCAGGTGTTGAAACTGCTTTTTAGCATCAACGTACGGAACCGGGTCAAACCGGGTTTACCAGAAGGTTACTACGGTAACGCATTCGTATTGGGATGCGCAGTGACGAGAGCTAGGGATCTGGAGGAGAAAGGAATCGGGTACGGGTCGGGATTGGTAAGAATGGCGAAGGAAAGAGTGGGGAAGCAGTACGTGAGGGAAGTGAGTGAGTTAGTGTCCGAGTCAATGGCGAATCCGGACTCAGTGGGAGTGCTTATAGTGTCGCAGTGGTCGAGGTTGGGAATGGAGAGGGTGGATTTCGGGATGGGGAAGCCGGAGCACGTGGGATCGGTGTGCTGCGACAGATACTGTTTATTTTTGCCGGCGAGTGATAATGAAGATGAGAGTAGGGAGGGCGTGAAGGTGATGGTGGCGGTGCCTACTTTCGCCGTTGACAGTTACCAGTTCTTGATGCGAGATTCCAATCTTTAA 1341 0.5548 MATSVQVKQALVITPSEPTPARVLALSAIDSQLFLRFTVEYLLVYRAWHGLDQAATTARLKSALAEALVPYYPFAGRIRPRPDAPGLEVLCRAQGAVFIEAFSDRYSSNDLEKPPKTVAQWRKLLSLHVADVLRGSPPLVVQLTWLRDGAAAIAVGISHCISDGIGSAEFLNYFAELASGKRVAGSRPKPVWERHLLNPPPPAGKKCVRVNPASHPEFNRVPDLCDFMNLVSTGLKPTSITFDKMRLGELKRLAQCTSQPGDESSSFYTSFEVLAAHVWRSWARALEFPPNQVLKLLFSINVRNRVKPGLPEGYYGNAFVLGCAVTRARDLEEKGIGYGSGLVRMAKERVGKQYVREVSELVSESMANPDSVGVLIVSQWSRLGMERVDFGMGKPEHVGSVCCDRYCLFLPASDNEDESREGVKVMVAVPTFAVDSYQFLMRDSNL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0247 446 Pfam Transferase family 4 432 - -
Amo17g0247 446 Gene3D - 233 439 IPR023213 -
Amo17g0247 446 Gene3D - 3 218 IPR023213 -
Amo17g0247 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 440 - -
Amo17g0247 446 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0247 Amo-Chr17 3683335 3685337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0247 5 416 Monolignol Biosynthesis Gene Families AT5G48930 28.074 7.79e-40 146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0247 17 3683335 3685337 Amo17g0247 17 3683335 3685337 ECH