Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0237 ATGGCAACTTCCGTACATGTAAAACAAGCCCTCGTTATTACTCCCTCCGAGCCCACGCCGGCCCGCGTCCTCGCTCTTTCAGCTCTTGACTCCCAACTATTCCTTCGTTTCACCGTAGAGTACCTCTTCGTCTACCGGGCCTGGCACGGGCTTGATCAGGCTGCCACCACAGCCCGTCTAAAATCGGCATTAGCTGAAGCGCTTGTTCCCTACTATCCGTTTGCAGGCAGGATCAGGCCCCGCCCAGATGCCCCGGGCCTTGAGGTTGTCTGCCGGGCCCAGGGTGCAGTGTTCATCGAGGCCTTTTCTGACCGTTACAGTTCCAACGACTTAGAGAAACCGCCGAAAACTGTTGCTCAGTGGAGAAAACTGTTGTCCCTCCACGTGGCAGACGTTCTAAGAGGATCCCCGCCGCTGGTCGTTCAGCTCACGTGGCTCCGCGACGGTGCAGCAGCGATCGCCGTTGGAATCAGTCACTGTATCTCCGATGGAATCGGAAGTGCAGAGTTTCTCAACTACTTCGCGGAGTTAGCTTCTGGAAAACGCGTCGCCGGTTCAAGACCGAAACCTGTTTGGGACCGTCACCTCCTGAATCCGCCACCACCGGCGGGAAAGAAATGCGTCCGGGTCAACCCGGCGAGTCACCCAGAATTCAACCGAGTTCCTGACCTCTGTGACTTCATGAACCTGGTCTCTACCGGACTCAAGCCTACCTCCATCACCTTCGATAAAATGAGGCTCGGCGAGTTGAAGAGGCTCGCCCAGTGCACGAGTCAACCCGGCGATGAGTCATCGTCGTTCTACACGTCTTTCGAGGTCCTCGCAGCTCACGTGTGGAAGAGCTGGGCCAGAGCACTGGAATTTCCGCCAAATCAGGTGTTGAAGCTGCTTTTTAGCATCAACGTGCGGAACCGGGTCAAACCGGGTTTACCAGAAGGTTACTACGGTAACGCATTCGTATTGGGATGCGCAGTGACGAGAGCTAGGGATCTGGAGGAGAAAGGAATCGGGTACGGGTCGGGATTGGTAAGAATGGCGAAGGAAAGAGTGGGGAAGCAGTACGTGAGGGAAGTGAGTGAGTTAGTGTCCGAGTCAATGGCGAATCCGGACTCGGTGGGAGTGCTTATAGTGTCGCAGTGGTCGAGGTTGGGAATGGAGAGGGTGGATTTCGGGATGGGGAAGCCGGAGCACGTGGGATCGGTGTGCTGCGACAGATACTGTTTGTTTTTGCCGGCGAGTGATGAAGATGAGAGTAGGGAGGGCGTGAAGGTGATGGTGGCGGTGCCTACTTTCGCCGTTGACAGTTACCAGTTCTTGATGCGAGATTCCAATCTTTAA 1338 0.5561 MATSVHVKQALVITPSEPTPARVLALSALDSQLFLRFTVEYLFVYRAWHGLDQAATTARLKSALAEALVPYYPFAGRIRPRPDAPGLEVVCRAQGAVFIEAFSDRYSSNDLEKPPKTVAQWRKLLSLHVADVLRGSPPLVVQLTWLRDGAAAIAVGISHCISDGIGSAEFLNYFAELASGKRVAGSRPKPVWDRHLLNPPPPAGKKCVRVNPASHPEFNRVPDLCDFMNLVSTGLKPTSITFDKMRLGELKRLAQCTSQPGDESSSFYTSFEVLAAHVWKSWARALEFPPNQVLKLLFSINVRNRVKPGLPEGYYGNAFVLGCAVTRARDLEEKGIGYGSGLVRMAKERVGKQYVREVSELVSESMANPDSVGVLIVSQWSRLGMERVDFGMGKPEHVGSVCCDRYCLFLPASDEDESREGVKVMVAVPTFAVDSYQFLMRDSNL* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0237 445 Gene3D - 3 218 IPR023213 -
Amo17g0237 445 Gene3D - 233 438 IPR023213 -
Amo17g0237 445 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 439 - -
Amo17g0237 445 Pfam Transferase family 4 431 - -
Amo17g0237 445 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0237 Amo-Chr17 3538736 3541139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0237 5 418 Monolignol Biosynthesis Gene Families AT5G48930 28.176 2.17e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0237 - - gmx:100817048 653.284