Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0236 ATGGTTCAAAAAATTAGGATTCAGTTATACCAAAACACAAACCATGTTCATTTTTCTATGAACGGTGCCGACACAACCAAGAACCGAACCCCTCTCGCCAACGTCCACACCGGTGAACGCCCAGAAGCGCATTCCCAGCGTGTGGCTCCTTCTGGCGGCACCGCATCAAGTCCACCTGCCCAGCCGGCCTGTGATAAAAATAACTGCATTGTTATTGTTAAGACTTTTCCCGAAAATGCCATGCCAAGATTGGATGTTACTGAGGTTGGAAGTGAAGAGATGGATATTTGTTACGAGGACATGCCGCTTTTGGATCTTTCGCAAGTTGGAAGTGAAGAAATGGATCATGAAGATGAAATACCATGTGTTGGAATGCGGTTTGAGCAATTGCAAATGGCTCATGAATTCTATGTGACATACGCAAAGAAAGTCGGGTTTGCTACTAAGATACGGACGACAACCTGTGATAAGATCACAAATCAACCCATTAACCAAGCTATTCACTGTAATAGGGATGGGTTCCGTGTGTCTCGTGTCAAAGCGTCAACGCGGAAGAACAGGATCTCAGCCGCTGGGTGCAAGGCAAGGATATACGTGAAGTTTGACAAGGAGACGCAAGACTGGTTTTTCTTCAAGGTGGAGTTGAGTCACTCGCACCCATGTTCAGCGAGAAAGGCGGTGCACTACCATGAGTATAGGAAGCTGACCATGCATGCGAAGTGCGTGGATTTATATGATTTAATAAGAAGTTTATTTTTTTATGTAGACCTCTTTGATGATCGACGCATGTGGGTCCCAATATTCTTCAAGGGTGAATTTTGGGCTGCCATGAGGAGCACGCAAAGGAGTGAGAGCATGCACTCATTCTACGGAAATTTCTTACACAGTCGGACTAGCTTGGTCCAATTTGTTCACGAATATGACAATGTGCTTGGAATTAAGGAGCAAAGGGAACTGGAGGATGATGCAGCATACTCGTGGGGGGGGGGGCAGGAGTACACTACCTGCATGTTTAGGGATGTTCAAATTGAGTTTGTCAAGAAGGCTAATTGTATGGTCTCTGTTGTTGCTGAAGAGGGGCCAGTGGTATGCATGAAGGTTGAAGAGGAAAAACTAGTGAATGATAGTATTCTTTGTGTTCTGTACGACGTCCACTTCGATCGATCCACACAGGAGGTTTGTTGTGAGTGCAATCTATTTGAGAGTTCAGGAGTGTTATGCTGTCATTGTCTTGAAGTCTTCCATTCTTACAAGGTTTATAAAGTACCTAATCGATATGTTCTCCCTCGTTGGAGCAAGAACACAAAGCGCAAGCATACATATGTCAAGAGTAGTCACGACGTCAGTCGGTCGGATGAGAGTCATGATTTTGTAAACGACGATGAAGAAACAGCCTTGCTTCATGCTGCTCTAGAAGAAACAAGAGCTAAGTTGACTGCTCACCGTGTCAAGAAGAGGTCTGAGACTGTGGCGGACTCCTACAACAATAATGGCTCAACAAGTTCGAACGTTGCCGCTGTAATGGACATCCAAGCCCCATCGAAGGTCAACACAAAGGGCCGGCCAAAGAGTAAGAGGCTCGGCGCTGCCCTGGAGAAGTCATTTAAAAAATCTGCTCGGAGGAAAAACAAGCATGACCCCCCGGTGGTTTGTCCGGAGTCAACTCAAGATGTAAGATTCGGTGGTGTTGTAGGCCAGGCTGATCCCGAACAAGTTGGTGGCTTCATATTAGTGGAAGAGGCTGGTTTCATGGGGTAA 1758 0.4602 MVQKIRIQLYQNTNHVHFSMNGADTTKNRTPLANVHTGERPEAHSQRVAPSGGTASSPPAQPACDKNNCIVIVKTFPENAMPRLDVTEVGSEEMDICYEDMPLLDLSQVGSEEMDHEDEIPCVGMRFEQLQMAHEFYVTYAKKVGFATKIRTTTCDKITNQPINQAIHCNRDGFRVSRVKASTRKNRISAAGCKARIYVKFDKETQDWFFFKVELSHSHPCSARKAVHYHEYRKLTMHAKCVDLYDLIRSLFFYVDLFDDRRMWVPIFFKGEFWAAMRSTQRSESMHSFYGNFLHSRTSLVQFVHEYDNVLGIKEQRELEDDAAYSWGGGQEYTTCMFRDVQIEFVKKANCMVSVVAEEGPVVCMKVEEEKLVNDSILCVLYDVHFDRSTQEVCCECNLFESSGVLCCHCLEVFHSYKVYKVPNRYVLPRWSKNTKRKHTYVKSSHDVSRSDESHDFVNDDEETALLHAALEETRAKLTAHRVKKRSETVADSYNNNGSTSSNVAAVMDIQAPSKVNTKGRPKSKRLGAALEKSFKKSARRKNKHDPPVVCPESTQDVRFGGVVGQADPEQVGGFILVEEAGFMG* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0236 585 MobiDBLite consensus disorder prediction 21 61 - -
Amo17g0236 585 PANTHER OS03G0843700 PROTEIN 105 231 - -
Amo17g0236 585 MobiDBLite consensus disorder prediction 535 554 - -
Amo17g0236 585 PANTHER OS03G0843700 PROTEIN 256 491 - -
Amo17g0236 585 ProSiteProfiles Zinc finger SWIM-type profile. 382 418 IPR007527 GO:0008270
Amo17g0236 585 Pfam FAR1 DNA-binding domain 135 221 IPR004330 -
Amo17g0236 585 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 105 231 IPR031052 GO:0006355
Amo17g0236 585 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 256 491 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0236 Amo-Chr17 3501263 3505787 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g0236 FAR1 1.4e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0236 - - ahf:112732819 555.058