Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0204 ATGAAATTGGAACCCAACACAATAACCACAACCGCCACCCAAGTTAATGTCCCTCTCCTCGACGACTCCCAGGAAGATTCTCAACAACATGGGTCCATTTCCGGGGCAGTCTTCAACATCTCAACCACCATGATCGGTGCTGGAATCATGTCGATTCCGGCAACCATCAAGGTTCTGGGCATACTCCCTGGCTTCATTCTTATTGTTTTTGTGGCGTTGGTAACCGATGTCACCGTGGAGTTTATGTTAAGGTACACCGCACATGGAAAATCTCTTACATATGCTTCCATGGTTGGTGAATCATTTGGCTCATTGGGCTCCCTTGCCGTCAAGATTTGTGTCATCACAACAAACCTTGGTGTTCTTATCATTTACTTCATTATTCTCGGAGACGTGCTGTGTGGAAATGAATCGAAAGGAAGCACACATTTGGGCATCCTTCAAGAATGGTTTGGGATCCACTGGTGGACCTCGCGCGCTTTTGCTCTTCTTCTAGTTGCTCTTTTCATAATGCTCCCACTTGTTATGTTACGCCGTGTTGATTCATTAAGGTATAGTTCAGCAATATCAATCCTACTAGCATTGGTGTTTGTTGCAATATGCTCTTCCATGGCTTTTTATGCATTGTGGTGCGGCAAAACTCAGCCACTGAGGTTACTTCCTGATTTCTCTCAAGTCACTGTCCTTGATCTTTTCACCACTGTCCCTGTCTTTCTCACTGGTTTTGGATTTCATGTCAATGTTCATCCAATTAGAGCAGAGCTAGGAAAACCAGGGGACATGAATTTGGCAGTGAGGATAGCATTGATGATATGTGTAGGCATATACTTTGCAATTGGCTTCTTTGGTTACCTGTTGTTTGGAGACTCAATCATGGCAGATATGTTAGTCAACTTTGACCAAAACTCCAACACAAGTGGTGGTAGATTGCTCAATGACATAGTTAGGTTAAGCTATGCACTCCACCTTGCCCTTGTATTCCCCATCATGAATTATTCCTTGAGGGCCAACATTGATGAACTTATTGCATTCTCAAATCGTGATAATAACAATAGGCCTCCTCTTGCATTAGACACACCAAGATTTGTGTCATTAACTCTTGGATTGCTAGCATTCACATATTTGGTGGCAGTGGCAATTCCAAACATTTGGTATTTCTTTCAGTTCTTGGGCTCTACTACCATTGTTTGCCTCTCATTCATTTTCCCTGCCTCAATCATTCTAAGGGATACGCATGGCATATCAAAGACAAAAGATCAAGTGATGGCAATAGTAGTGATAGTTTTGGCTGTAGGGACCAGTGGAATTGCTATATGGACCAACTTGTATGCACGCGTCCCACTCTTGCCAGCTACTAAGCTGGTGGCGGAGGTGCCTCCGGCGACGGTATCCGGTGCCGTGTTCAACGTGGCGACGAGCGTAATTGGCGCGGGAATTATGTCAGTTCCGGCGACGATGAAGGTGCTGGGAGTAGTTCCGGCGTTCTTGATGATATTTGTAACGGCGATTCTGGCGGAGATATCAGTGGAGTTTCTGATGAGGTTCACGCATTCCGGGGAAACGACGACGTATGCCGGCGTGATGAGGGAGGCGTTTGGTTCGTTAGGAGCAGTTGCTGCACAAGTTGGTGTTATAATCACTAACCTTGGATGCTTAATTATGTACCTAATTATTATCGGTGATGTTGTTTCTGGGAAGCAAGGAGAAGGAGAAGTACACTTGGGAATCTTGCAGCAATGGTTTGGAATTCAATGGTGGAATTCTCGTGAATTTGCACTCCTTATTGTCTTGATTTTTGTTATGCTTCCCTTGGTCATGTTCCGTCGCGTAGAGTCGTTGAAATTCAGCTCTGCAATATCAACGTTTCTTGCTGTGGCATTTGTTGGAATATGTTCGGTTATGGCTATTATTGCTATTGTGCAAGGACACACACAAATGCCTAGATTTTTTCCTCAATTGGATCAAAATACTTCTTTCTTTGATCTCTTCACAGCTGTTCCTGTCATTGTCACAGCCTACACTTTCCATTTCAATGTGCATCCAATTGGTTTTGAGCTTGAGAAGCCATCAGACATGACGAAAGCGGTTAGAATAGCATTGTTGCTGTGTGCCGGAATATACTTTGCAATAGGGCTATTTGGGTACCTGTTGTTTGGAGATTCAATAGAATCAGACATTCTCATAAACTTTGATCAGAATGCTACTGGTTCTGCTGTTGGTTCATTGCTTAACACATTGGTCCGTTTGAGCTATGCTTTCCATGTGATGTTGGTGTTCCCTTTGCTCAACTTCTCATTGAGAGCCAACATTGATGAGTTCCTGTTCCCCAAGAAGCCTCTTCTTTCCACAGACAACAAGAGATTTCTTACCATTACTCTCGCATTGTTGGTGTCTAGCTATGTTTTTGCTATAGCACTTCCAGATATTTGGTACTTCTTTCAATTTCTTGGATCAACTTCTGCTGTCTGCCTTGCCTTCATCTTCCCTGCTTCAATTGTTTTAAGAGATGCTCCTGGTATAGCAACAAAGAGGGACAAAATGATAGCACTAATTATGGTTATAGTAGCTGCAGTAACAAGTGTGATTGCCATCTCCACCAACATATGCAATTATTTCGGTAGCAGTAGTTCATGA 2634 0.4339 MKLEPNTITTTATQVNVPLLDDSQEDSQQHGSISGAVFNISTTMIGAGIMSIPATIKVLGILPGFILIVFVALVTDVTVEFMLRYTAHGKSLTYASMVGESFGSLGSLAVKICVITTNLGVLIIYFIILGDVLCGNESKGSTHLGILQEWFGIHWWTSRAFALLLVALFIMLPLVMLRRVDSLRYSSAISILLALVFVAICSSMAFYALWCGKTQPLRLLPDFSQVTVLDLFTTVPVFLTGFGFHVNVHPIRAELGKPGDMNLAVRIALMICVGIYFAIGFFGYLLFGDSIMADMLVNFDQNSNTSGGRLLNDIVRLSYALHLALVFPIMNYSLRANIDELIAFSNRDNNNRPPLALDTPRFVSLTLGLLAFTYLVAVAIPNIWYFFQFLGSTTIVCLSFIFPASIILRDTHGISKTKDQVMAIVVIVLAVGTSGIAIWTNLYARVPLLPATKLVAEVPPATVSGAVFNVATSVIGAGIMSVPATMKVLGVVPAFLMIFVTAILAEISVEFLMRFTHSGETTTYAGVMREAFGSLGAVAAQVGVIITNLGCLIMYLIIIGDVVSGKQGEGEVHLGILQQWFGIQWWNSREFALLIVLIFVMLPLVMFRRVESLKFSSAISTFLAVAFVGICSVMAIIAIVQGHTQMPRFFPQLDQNTSFFDLFTAVPVIVTAYTFHFNVHPIGFELEKPSDMTKAVRIALLLCAGIYFAIGLFGYLLFGDSIESDILINFDQNATGSAVGSLLNTLVRLSYAFHVMLVFPLLNFSLRANIDEFLFPKKPLLSTDNKRFLTITLALLVSSYVFAIALPDIWYFFQFLGSTSAVCLAFIFPASIVLRDAPGIATKRDKMIALIMVIVAAVTSVIAISTNICNYFGSSSS* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0204 877 Pfam Transmembrane amino acid transporter protein 461 861 IPR013057 -
Amo17g0204 877 Pfam Transmembrane amino acid transporter protein 31 421 IPR013057 -
Amo17g0204 877 PANTHER AMINO ACID TRANSPORTER 446 872 - -
Amo17g0204 877 PANTHER AMINO ACID TRANSPORTER 14 444 - -
Amo17g0204 877 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 446 872 - -
Amo17g0204 877 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 14 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0204 Amo-Chr17 2989286 2999331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0204 445 868 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.000 8.67e-172 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0204 - - ahf:112765408 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0204 17 2989286 2999331 Amo17g0204 17 2989286 2999331 ECH
Amo20g1295 20 27114740 27117590 Amo17g0204 17 2989286 2999331 PCT
Amo10g0859 10 13914834 13917629 Amo17g0204 17 2989286 2999331 PCT