Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0199 ATGGCTTCTACTGATTCTTTGCTCTTGTTTGCTCTTGTTGCTGCAGCTACAGTTTCTGAAGCAAATGCTGCTCAGCTGCGTGCAGATTTCTACTCCTGCAGCTGCCGGAACCTTCTGGCCATAGGATGTGATGCATCGATACTGCTGGACGATACGAGCAAGTTCATAGGAGAGCAGACGGCGGCGGCGAACAACAATTCAGCAAGGGGGTTCAATGTGATTGATGACATCAAAGCCATGGTGGAGAAAGAATGCCCTGGGGTGGTGTCATGTGCTGATATTCTTGCATTGGCTGCTAGAGACTCTGTAGTTTATTTGGGAGGGCCATCTTGGGAAGTAGGCTTAGGAAGAAGAGATTCTACTACAGCAAGCAGACTTGATGCTAATAACTCCATTCCTGCACCCTCCTTCAGTCTAAGGGCACATACCATTGGCCTAGCTCAATGCAGACTTTTCCGACCACATATCTACAATGACACCAACATTGATGCCTCCTATGCCAAATTCTTGCGGAGCAAGTGTCCCAGAACTGGAAAAGACAGATTGCTCGAACCCCTCGACCATCAAACTCCCTTCCATTTCGATAACCTGTACTATAAGAATTTAGTTCAGAAGAAGGTTCTTCTTCATTCTGACCAGGAGCTGTACAACGGCGGTTCTACCGACCATCTGGTGGGGAAATATGCTACGGATAGAGTTGCATTCTTTAATGACTTTGCCAAGGGCATGGTGAAAATGAGCAGGATCAAGCCTCTCACAGGAAAAAAGGGGGAGATTAGACTCAATTGTGCTAAAGTCAACTAA 804 0.4677 MASTDSLLLFALVAAATVSEANAAQLRADFYSCSCRNLLAIGCDASILLDDTSKFIGEQTAAANNNSARGFNVIDDIKAMVEKECPGVVSCADILALAARDSVVYLGGPSWEVGLGRRDSTTASRLDANNSIPAPSFSLRAHTIGLAQCRLFRPHIYNDTNIDASYAKFLRSKCPRTGKDRLLEPLDHQTPFHFDNLYYKNLVQKKVLLHSDQELYNGGSTDHLVGKYATDRVAFFNDFAKGMVKMSRIKPLTGKKGEIRLNCAKVN* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0199 267 PANTHER PEROXIDASE 141 267 - -
Amo17g0199 267 PANTHER PEROXIDASE 22 140 - -
Amo17g0199 267 SUPERFAMILY Heme-dependent peroxidases 25 267 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 Gene3D Peroxidase, domain 2 141 246 - -
Amo17g0199 267 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 PRINTS Haem peroxidase superfamily signature 22 36 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 CDD secretory_peroxidase 25 266 IPR033905 GO:0004601|GO:0042744
Amo17g0199 267 Pfam Peroxidase 141 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 Pfam Peroxidase 22 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 Gene3D - 247 267 - -
Amo17g0199 267 Gene3D - 19 132 - -
Amo17g0199 267 PRINTS Plant peroxidase signature 201 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 PRINTS Plant peroxidase signature 88 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 PRINTS Plant peroxidase signature 69 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 PRINTS Plant peroxidase signature 241 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 PRINTS Plant peroxidase signature 29 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 PRINTS Plant peroxidase signature 185 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 PANTHER PEROXIDASE 72-RELATED 22 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 PANTHER PEROXIDASE 72-RELATED 141 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0199 267 ProSiteProfiles Plant heme peroxidase family profile. 42 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0199 Amo-Chr17 2922640 2924056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0199 24 267 Peroxidase AT5G05340 49.832 1.54e-92 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0199 K00430 - gmx:100793973 379.022