Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0198 ATGGGTTCAAATAATCTAGTTATGATTGGTTTGTTCCTCCTTGTCCTTGTGTTGGGTAGTGCCAATGCATCACTTTCCACAGAGTTCTATTCAAGTTCATGTCCAAAACTCCTTGACACTGTGAAATGCACAGTGGAAGCTGCCATCAAAAAAGAGACTCGCATGGGTGCTTCTCTCCTACGTTTGTTCTTCCATGATTGCTTTGTTAATGGATGTGACGGTTCAATTCTTCTGGATGATACATCAAGCTTCAAAGGAGAGAAGAATGCGGGTCCCAACAAGAACTCTGCCCGCGGATTCGAAGTGATCGACGCCGTCAAGTCCGCCGTTGAGAAAGTCTGCCCTGGTGGTCACACAATTGGACAAGCAAGGTGTACAACCTTTAGATCCCACATCTACAATGAGACCAACGAGTTAGTAACATCCTTTGCTCAAACAAGGCAATCAAAATGCCCTAGGGCATCCGGTGTGGGGGACAACAACCTCGCCCCCCTTGATCTTCAGACGCCGGCGTCATTCGACAACCACTACTTCAACAACCTCATTGACCGGAAAGGCCTCCTCCATTCCGACCAGCAACTCTTCAACGGAGGATCCACTGACTCCATTGTTCGCGGCTACAGCTCAAACCCTAGCTCTTTTTTCGCCGATTTTGCCAGTGCCATGATCAAGATGGGAGACATAAATCCCCTCACTGGATCCAAGGGAGAGATTAGAAAGAATTGCAGGAGTGTGAACTAA 741 0.4764 MGSNNLVMIGLFLLVLVLGSANASLSTEFYSSSCPKLLDTVKCTVEAAIKKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFKGEKNAGPNKNSARGFEVIDAVKSAVEKVCPGGHTIGQARCTTFRSHIYNETNELVTSFAQTRQSKCPRASGVGDNNLAPLDLQTPASFDNHYFNNLIDRKGLLHSDQQLFNGGSTDSIVRGYSSNPSSFFADFASAMIKMGDINPLTGSKGEIRKNCRSVN* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0198 246 PANTHER PEROXIDASE 116 245 - -
Amo17g0198 246 PANTHER PEROXIDASE 72-RELATED 116 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0198 246 Gene3D Peroxidase, domain 2 117 225 - -
Amo17g0198 246 Gene3D - 28 116 - -
Amo17g0198 246 PANTHER PEROXIDASE 72-RELATED 7 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0198 246 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0198 246 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0198 246 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0198 246 ProSiteProfiles Plant heme peroxidase family profile. 24 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0198 246 SUPERFAMILY Heme-dependent peroxidases 25 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo17g0198 246 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Amo17g0198 246 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0198 246 PRINTS Haem peroxidase superfamily signature 166 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0198 246 Pfam Peroxidase 42 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0198 246 CDD secretory_peroxidase 25 245 IPR033905 GO:0004601|GO:0042744
Amo17g0198 246 PANTHER PEROXIDASE 7 116 - -
Amo17g0198 246 Gene3D - 226 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0198 Amo-Chr17 2899181 2902194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0198 116 246 Peroxidase AT5G05340 72.519 1.95e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0198 K00430 - sspl:121793461 234.572