Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0197 ATGGGTTCATTTAGTTCTAATAAGCTAGTTATGATTGGTTTGTTCCTCCTTATCCTTGTGTTGGGTAGTGCCAATGCATCACTTTCCACAGAATTCTATTCAAGTTCATGTCCAAAACTCCTTGACATTGTGAAATGCACAGTGGAAGCTGCCATCAAAAAAGAGACTCGCATGGGTGCTTCTCTCCTACGTTTGTTCTTCCATGATTGCTTTGTTAATGGATGTGACGGTTCAATTCTTCTGGATGATACATCAAGCTTCAAAGGAGAGAAGAATGCGGGTCCCAACAAGAACTCTGCCCGCGGATTCGAAGTGATCGACGCCGTCAAGTCCGCCGTTGAGAAAGTCTGCCCTGGTGTTGTCTCCTGCGCTGACATCCTCGCCATCGCTGCCAGAGACTCCGTCAAGATCCTTGGAGGGCCCGAGTGGGATGTAAAACTTGGAAGAAGAGATGCAAGAACAGCCAGCCAATCTGCTGCCAACAACGGGATACCAGCACCAACTTCAACCCTAAATCAATTAATCTCAAAATTCGGGGCACTTGGACTTTCTACCAAGGACTTGGTCGCATTGTCTGGTGGTCACACAATTGGACAAGCAAGGTGTACAACCTTCAGATCCCACATCTACAATGAGACCAACGAGTTAGTAACATCCTTTGCTCAAACAAGGCAATCAAACTGCCCTAGGGCATCCGGTGTGGGGGACAACAACCTCGCCCCCCTCGATCTTCAGACACCGGCGTCATTCGACAACCACTACTTCAACAACCTCGTCGACCGAAAAGGCCTCCTCCATTCCGACCAGCAACTCTTCAACGGAGGATCCACTGACTCCATTGTTCGCGGCTACAGCTCAAACCCTAGCTCTTTTTTCGCAGATTTTGCCAGTGCCATGATCAAGATGGGAGACATAAGTCCCCTCACTGGATCCAAGGGAGAGATTAGAAAGAATTGCAGGAGTGTGAACTAA 972 0.4825 MGSFSSNKLVMIGLFLLILVLGSANASLSTEFYSSSCPKLLDIVKCTVEAAIKKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFKGEKNAGPNKNSARGFEVIDAVKSAVEKVCPGVVSCADILAIAARDSVKILGGPEWDVKLGRRDARTASQSAANNGIPAPTSTLNQLISKFGALGLSTKDLVALSGGHTIGQARCTTFRSHIYNETNELVTSFAQTRQSNCPRASGVGDNNLAPLDLQTPASFDNHYFNNLVDRKGLLHSDQQLFNGGSTDSIVRGYSSNPSSFFADFASAMIKMGDISPLTGSKGEIRKNCRSVN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0197 323 CDD secretory_peroxidase 28 322 IPR033905 GO:0004601|GO:0042744
Amo17g0197 323 PANTHER PEROXIDASE 10 322 - -
Amo17g0197 323 PANTHER PEROXIDASE 72-RELATED 10 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Amo17g0197 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Amo17g0197 323 Gene3D Peroxidase, domain 2 165 302 - -
Amo17g0197 323 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 Gene3D - 31 323 - -
Amo17g0197 323 SUPERFAMILY Heme-dependent peroxidases 28 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 Pfam Peroxidase 45 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0197 323 ProSiteProfiles Plant heme peroxidase family profile. 27 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0197 Amo-Chr17 2887883 2890733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0197 26 323 Peroxidase AT5G05340 74.832 7.94e-168 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0197 K00430 - gmx:100803637 520.39