Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0193 ATGGTGAAAGCCAAAGAAGAGCTTTTAGTAGTGCTTGGCAAAAATGAAAAGCCTCAGGAATCAGACATGTCAAAACTTCCTTACTTGGATGCAATTGTGAAGGAAATCTTCCGAATGCACTCTCCAATAGGACGAAATTCTAGTACTTGGAATAATCCAAATTCCTTTGTGCCAGAAAGGTTTATAGAACGCAAAATGGATACTAATAAAGACTTCAATAATTTTGAGTTAATTCCATTTCGGCTGGAAGAAGAATGTATTGCGGGTGAGAAGAAACTAGAAGAATTAGACATGAGAGAAAAAAAAGTTTCCAAACCCACCATAAAAATGCCACCAGGTCCTTACCCTTATCCCATAATAGGAAACATCTTAGAACTACTTAGCCATAAACCCTATGAATCACTCTTTCACCTTTCCAAAACATATGGCCCCATAATGACTCTCAAGTTTGGAACCTTAACCGCTGTTGTAATCTCTTCTCCAGAGATAGCCAAAGAAGCATTAACCAAACATGACTTAGCATTTTCCAATAGGCAAGTCCTTCATATCACTACAGCACTTGGCCACAACAAAGTCTCTATGGTGTGGTCACCCGTATGTGATCATTGGAGAACACTAAGAAAACTATGTTCCACAAACATATTCTCCCCTCAAAGGCTTGAATCAACTAGCAAACTTCGCAACAAAAAAGTGCAAGAATTGGTGAATTTTGTGGGAACATGTTCCACCAAAGGTGAAGCTATTGATATTGGTAATGTTGTGTTCATAACAATAATGAATTCATTGTCCAATACCCTTTTTTCTATGGATCTTGCACACTACTATGGAGCTAGTGATGATGATCATCATGGATCTCAAAATTTCAAGGAGCTTATAGAGGGTATATTGGATGATGCTGGAAAGATTAACGTTGTAGATCTTTTTCCAATTCTAAGTTTCCTTGATCCACAGGGCCTTAGAGGAAGGTGTGAAGAATCTTTTAAAAGGTTGTTGGAGGTTTTCAATGATATTTTTGAGGAAAGAATGCGACTAAAAGTATTATCGTCCGACAAAAGCAGTTTTGGAGGAACTTTTTATGATGTACTAGATTGTTTCTTGGATCTTCCCAAAGTGTATGAGTCTTCAGAACTGAGTCGCCACCATTTATTACATCTATTTCTAGACTTATTTATTGCTGGATTAGAGACAACAACAAGCACGGTGGAATGGGCAATGGCAGAATTGGTGCATAACCCTAAAAAAATGGCTAAAGCCAAAGAAGAGCTCTTACAAATTCTTGGTAGAGATGAAAACCCTAAAGAATCAGACATATCAAAGCTAACTTACTTGGAGGCAATTGTAAAGGAAACATTTCGGTTACACACTCCAATTCCCATTTTGTTCCACAAATCAAATTTCAATGTAGAAATTAATGGCTTCAAAGTTCCCAAACATGCAGAAGTTTTAGTTAATTTATGGGCCATAGGACGTAATTCTAGCATTTGGAGTAATCCAAATTCCTTTGTGCCAGAAAGGTTTCAAGAGTGCAAAATGGACACTAAAGACAACAATTTTGAGTTCATTCCGTTTGGAGCTGGAAGAAGAATGTGTCCTGCAATTTCATTGGTACATAGAATAGTACCTTTGATTTTAGCCACTCTTTTGCATTGTTTTGATTGGAAGATTGCGGATGAGAAGCAACCACAAGAGTTAGACATGAGAGAAGAATATGGTCTTACTGTGCGTAGGGCTCAACCACTTTTACTCATTCCAATTCATACCATTTAA 1767 0.3741 MVKAKEELLVVLGKNEKPQESDMSKLPYLDAIVKEIFRMHSPIGRNSSTWNNPNSFVPERFIERKMDTNKDFNNFELIPFRLEEECIAGEKKLEELDMREKKVSKPTIKMPPGPYPYPIIGNILELLSHKPYESLFHLSKTYGPIMTLKFGTLTAVVISSPEIAKEALTKHDLAFSNRQVLHITTALGHNKVSMVWSPVCDHWRTLRKLCSTNIFSPQRLESTSKLRNKKVQELVNFVGTCSTKGEAIDIGNVVFITIMNSLSNTLFSMDLAHYYGASDDDHHGSQNFKELIEGILDDAGKINVVDLFPILSFLDPQGLRGRCEESFKRLLEVFNDIFEERMRLKVLSSDKSSFGGTFYDVLDCFLDLPKVYESSELSRHHLLHLFLDLFIAGLETTTSTVEWAMAELVHNPKKMAKAKEELLQILGRDENPKESDISKLTYLEAIVKETFRLHTPIPILFHKSNFNVEINGFKVPKHAEVLVNLWAIGRNSSIWSNPNSFVPERFQECKMDTKDNNFEFIPFGAGRRMCPAISLVHRIVPLILATLLHCFDWKIADEKQPQELDMREEYGLTVRRAQPLLLIPIHTI* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0193 588 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 102 585 - -
Amo17g0193 588 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 42 - -
Amo17g0193 588 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 43 80 - -
Amo17g0193 588 PRINTS E-class P450 group I signature 484 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 PRINTS E-class P450 group I signature 139 158 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 PRINTS E-class P450 group I signature 401 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 PRINTS E-class P450 group I signature 444 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 PRINTS E-class P450 group I signature 520 530 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 PRINTS E-class P450 group I signature 381 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 PRINTS E-class P450 group I signature 163 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 PRINTS E-class P450 group I signature 530 553 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 SUPERFAMILY Cytochrome P450 111 584 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 102 585 - -
Amo17g0193 588 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 42 - -
Amo17g0193 588 Gene3D Cytochrome P450 1 82 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 Pfam Cytochrome P450 111 572 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 Pfam Cytochrome P450 3 43 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 PRINTS P450 superfamily signature 392 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 PRINTS P450 superfamily signature 521 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 Gene3D Cytochrome P450 97 581 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 43 80 - -
Amo17g0193 588 SUPERFAMILY Cytochrome P450 3 80 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0193 588 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 523 532 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0193 Amo-Chr17 2828952 2832933 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0193 1 80 Cytochrome P450 AT2G45550 37.500 9.60e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0193 - - ahf:112730581 821.617