Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0192 ATGCCTTTGTTTCATCACATTATCAAAGTCTCCAAAATATTATTAGTTAAACTTACCATAAAATTGCCACCAGGTCCATACCCTTATCCCATAATAGGAAACATCTTAGAGCTTAGCCATAAACCCTATGGATCACTCTATAAATTTTCTAAAACATATGGTCCTATAATGACTCTCAAATTTGGTAGTTTAACAACTATTGTTATTTCATCACAAGAGATAGCCAAAGAAGCATTAACCAAACATAACTTAGCATTTCCCAATAAGAAAGTCTTAGATATGACAAGAGCCCTTGACCACGTGTCTATGCTAGAATCAACTAGCACACTTCGCCACAAAAAGGTGCAAGAATTGGTGAATTTTGTGGGAACATGTTGCACCAAAGGTGAGGCTATTGATATTGGTAAGGTTGTATTCATAACAATAATGAATTCATTTTCCAATACACTTTTCTCTATCGATTTTGCTAACTATGGAGCTAGTGATGATGATGATCATGGTTCTCATCAAAATTTCAAGGAGCTTATAGAGGGAATATTGGACGATGCTGGAAAGATTAATGTAATAGATCTTTTCCCAATTATAAAATTTCTTGATCCACAAGGCCTAAGGGGAAGAGGTGAAGAATCTTTTAAGAGACTATTGAAGGCTTTCGATCATGATATCTTTGATGAACGAGTGCGGTTGAGAGCATCTTCTAACAAGAATCTTGGAGGGACTTGTGACGTGTTAGATTCTTTTCTAGATTTCATCGAAGTGAATAATGGTTCCGCAGATTTGGGCCGCCACCATTATTTAGTTTTTAATGTATTTGGTGACTTGTTTAATGCTGGGATAGAAACAACAACAAGCACAGTGGAATGGGCAATGAGAATTGCTATGTAA 885 0.3593 MPLFHHIIKVSKILLVKLTIKLPPGPYPYPIIGNILELSHKPYGSLYKFSKTYGPIMTLKFGSLTTIVISSQEIAKEALTKHNLAFPNKKVLDMTRALDHVSMLESTSTLRHKKVQELVNFVGTCCTKGEAIDIGKVVFITIMNSFSNTLFSIDFANYGASDDDDHGSHQNFKELIEGILDDAGKINVIDLFPIIKFLDPQGLRGRGEESFKRLLKAFDHDIFDERVRLRASSNKNLGGTCDVLDSFLDFIEVNNGSADLGRHHYLVFNVFGDLFNAGIETTTSTVEWAMRIAM* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0192 294 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 101 - -
Amo17g0192 294 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 103 290 - -
Amo17g0192 294 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 101 - -
Amo17g0192 294 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0192 294 PRINTS E-class P450 group I signature 50 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0192 294 PRINTS E-class P450 group I signature 74 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0192 294 Pfam Cytochrome P450 23 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0192 294 Pfam Cytochrome P450 111 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0192 294 Gene3D Cytochrome P450 17 293 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0192 294 SUPERFAMILY Cytochrome P450 19 290 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g0192 294 PANTHER CYTOCHROME P450 FAMILY PROTEIN 103 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0192 Amo-Chr17 2822973 2828941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0192 21 290 Cytochrome P450 AT3G61040 35.690 1.85e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0192 - - ahf:112728864 352.829