Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0185 ATGGGTTCAAATAATCTAGTTATGATTGGTTTGTTCCTCCTTGTCCTTGTGTTGGGTAGTGCCAATGCATCACTTTCCACAGAGTTCTATTCAAGTTCATGTCCAAAACTCCTTGACACTGTGAAATGCACAGTGGAAGCTGCCATCAAAAAAGAGACTCGCATGGGTGCTTCTCTCCTACGTTTGTTCTTCCATGATTGCTTTGTTAATGGATGTGACGGTTCAATTCTTCTGGATGATACATCAAGCTTCAAAGGAGAGAAGAATGCGGGTCCCAACAAGAACTCTGCCCGCGGATTCGAAGTGATCGACGCCGTCAAGTCCGCCGTTGAGAAAGTCTGCCCTGGTGTTGTCTCCTGCGCTGACATCCTCGCCGTCGCTGCCAGAGACTCCGTCAAGATCCTTGGAGGGCCCGAGTGGGATGTAAAACTTGGAAGAAGAGATGCAAGAACAGCCAGCCAATCTGCTGCCAACAACGGGATACCAGCACCAACTTCAACCCTAAATCAATTAATCTCAAAATTCGGGGCACTTGGACTTTCCACCAAGGACTTGGTCGCTTTGTCTGGTGGTCACACAATTGGACAAGCAAGGTGTACAACCTTTAGATCCCACATCTACAATGAGACCAACGAGTTAGTAACATCCTTTGCTCAAACAAGGCAATCAAAATGCCCTAGGGCATCCGGTGTGGGGGACAACAACCTCGCCCCCCTTGATCTTCAGACGCCGGCGTCATTCGACAACCACTACTTCAACAACCTCATTGACCGGAAAGGCCTCCTCCATTCCGACCAGCAACTCTTCAACGGAGGATCCACTGACTCCATTGTTCGCGGCTACAGCTCAAACCCTAGCTCTTTTTTCGCCGATTTTGCCAGTGCCATGATCAAGATGGGAGACATAAATCCCCTCACTGGATCCAAGGGAGAGATTAGAAAGAATTGCAGGAGTGTGAACTAA 963 0.486 MGSNNLVMIGLFLLVLVLGSANASLSTEFYSSSCPKLLDTVKCTVEAAIKKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFKGEKNAGPNKNSARGFEVIDAVKSAVEKVCPGVVSCADILAVAARDSVKILGGPEWDVKLGRRDARTASQSAANNGIPAPTSTLNQLISKFGALGLSTKDLVALSGGHTIGQARCTTFRSHIYNETNELVTSFAQTRQSKCPRASGVGDNNLAPLDLQTPASFDNHYFNNLIDRKGLLHSDQQLFNGGSTDSIVRGYSSNPSSFFADFASAMIKMGDINPLTGSKGEIRKNCRSVN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0185 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 Pfam Peroxidase 42 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 Gene3D - 28 320 - -
Amo17g0185 320 PANTHER PEROXIDASE 7 319 - -
Amo17g0185 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Amo17g0185 320 Gene3D Peroxidase, domain 2 162 299 - -
Amo17g0185 320 PANTHER PEROXIDASE 72-RELATED 7 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Amo17g0185 320 CDD secretory_peroxidase 25 319 IPR033905 GO:0004601|GO:0042744
Amo17g0185 320 SUPERFAMILY Heme-dependent peroxidases 25 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo17g0185 320 ProSiteProfiles Plant heme peroxidase family profile. 24 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0185 Amo-Chr17 2684117 2687127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0185 23 320 Peroxidase AT5G05340 74.497 5.99e-168 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0185 K00430 - gmx:100803637 516.153