Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0169 GAAGAGGGAGAACGAAGGGGAGAAGAGAGCCGAGGATGGAGAGGGAGGAGAAGAGGTCGCCGCTGTCCAGCTCGCACCACCATCGTCACACACTACTGCTGCCTCGTCGCCACCGCCGCACCTTGTCGTCGTAATCAGAGCCGCCACCGCTGTCTGTTGAAAGCATTCGCGTCGCCGCCAGAACCCTTGCCGTCGTCGTTGCCATTGGACGAAGGAGAGAGGAAAAGATGCGATGTACATAGCAGCTCACTGCCGTGCTTCATCTCTGCCGCTGCCATGGACGCCGGTGAGTTGCACGGTGTCATCGGGTGGTTGGATTCTTGGAGTTGTTGTTCTGCTACCGCCGTTGCTGTAGCCGTGCTTCTATTGCCGGAGAACGGCGCCGTTGTCGCCAGAGAACCACCGTTGAAGCCGCTACTGTTCTTTTATTCAGCTGCCGCCGGAACCCTTGTCTTCTTGATTGGTCGTTTAGATGACATTCACAGTGATGATGGTGAAAGAAGTGCTGATTTCCTTATAGATATGATGCCAGAGAAAGATGATGATGGCCGATTTGCAAGTGGAGGGTGGAATAGTGAGGATGGAAGGCTTAGCTGTGGGTATTCAAGCTTCAGAGGGAAGAAAGTATCGATGGAGGATTTTTACGATATTAAAACATTAAAAATTGGTGGTCATTCAGTATGCTTACTTGGAGTATTTGATGGTCATGGTGGTTTTCGTGGTGCAGAATATTTGAAAGAGCATCTCTTTGATAATCTCATGAAGCATCCAAAATCTTTTACTGATGCCAAATTGGCTATAAATTATAGGACTATAATATCGAAGGCTGGTAAGGCAATTGCTCTCTTTGAGGATCATGAGCCAAACAGAAGTGATGAACGAAAGAGGAATTGA 894 0.4888 EEGERRGEESRGWRGRRRGRRCPARTTIVTHYCCLVATAAPCRRNQSRHRCLLKAFASPPEPLPSSLPLDEGERKRCDVHSSSLPCFISAAAMDAGELHGVIGWLDSWSCCSATAVAVAVLLLPENGAVVAREPPLKPLLFFYSAAAGTLVFLIGRLDDIHSDDGERSADFLIDMMPEKDDDGRFASGGWNSEDGRLSCGYSSFRGKKVSMEDFYDIKTLKIGGHSVCLLGVFDGHGGFRGAEYLKEHLFDNLMKHPKSFTDAKLAINYRTIISKAGKAIALFEDHEPNRSDERKRN* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0169 297 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 270 296 - -
Amo17g0169 297 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 155 268 - -
Amo17g0169 297 SUPERFAMILY PP2C-like 193 296 IPR036457 -
Amo17g0169 297 PANTHER ALPHABET, ISOFORM E-RELATED 270 296 - -
Amo17g0169 297 Gene3D - 190 270 IPR036457 -
Amo17g0169 297 ProSitePatterns PPM-type phosphatase domain signature. 229 237 IPR000222 GO:0043169
Amo17g0169 297 PANTHER ALPHABET, ISOFORM E-RELATED 155 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0169 Amo-Chr17 2442166 2443487 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0169 172 296 PP2C-type Phosphatase Gene Family AT5G53140 52.695 5.65e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0169 K17506 - gmx:100805795 209.534