Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0163 ATGGTGATGAAAGATTTTTGCTTCTTTAGCAATTCAGAATTCACTCGAATACCCCTACTTTCCATAGCAACCACTTTCCTCCCACTTCCCTCCATCGACCAGAGGTTGCCGTCGTTGGCCGCTCACGTAACTGTTGAACACGCCGCTTACCTCGCCTGGTCGCCCCTCCAGTCTCTAGCCTCTGCTCATCTCACCATCACTCACCTCTACGGGTGCATTATTTACATGGAGGCTCTATCAGCAGATTGCACAACTGATGTGAATAATGAGTTTGAGTGGTCTTTAGAGGATGAAATAGACGATGTTGAAGGGTTAGAGTACGGAGACATTTTGGGGTTGACTGCTGGAGACATAATGAGGATGGTTTTCCGCAGCGATGATGGAGCTTATGAGTTTTACAGGGTGTTTGGTAAATTTCACGGATTTGGCATTCGAAAGGGTGATTGTGGTAAGGATGATGACGGAAGGTTGATTAAGAGGAGGTTTTTCTGTAATAGGGCAGGATTGAGGGAGCATAAACACTATAACCGAGTTGATAGGCGGCGGGAGCACAAGCCTGAGACCCGCACAAATTGTGATGCAAAGTTATCAATTTACCTTGATATCAACATCAATGTT 618 0.4579 MVMKDFCFFSNSEFTRIPLLSIATTFLPLPSIDQRLPSLAAHVTVEHAAYLAWSPLQSLASAHLTITHLYGCIIYMEALSADCTTDVNNEFEWSLEDEIDDVEGLEYGDILGLTAGDIMRMVFRSDDGAYEFYRVFGKFHGFGIRKGDCGKDDDGRLIKRRFFCNRAGLREHKHYNRVDRRREHKPETRTNCDAKLSIYLDININV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0163 206 Pfam FAR1 DNA-binding domain 131 198 IPR004330 -
Amo17g0163 206 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 115 198 - -
Amo17g0163 206 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 115 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0163 Amo-Chr17 2353641 2356129 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g0163 FAR1 5.2e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0163 - K13397 adu:107468207 153.68