Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0147 GCGTCCTGGGATTCTCCCAAACTCACTCGATCATGCTCAAACGTGGAAAGAAGGGATGTTCTCGGTAATACAATTCATCAATTCCCAGATTCAAAGTCGCAATCTTTCGAGAATTTACAGGAACTTACAGCAGGTAAAGTGGCTGCTAATCTTGAAAGCCCCAGGTCTGTGATGACTCACTGCAGTGCTGATAGAGTTATGTTGAGAAGGCATTTCTCAAGCCATGTTCTTCCTTCTGGAAGTAAGAGACTCTGGTGGAAGATGTTTCTCTGGAGCCATAGGAACATACATAGACCTATTTCAAGCAAATCAACACAGGTGAATCCTGGTGTGGCTGTAACGCACAATCCATACGGATACTCTTCCGACACCCTTGAACCGAAGCACAAGCAGTCACCAGGAAATGTGGAATGGCTCTTCAGCTATAATATAGAATCCTTGAGACTTGAATGTCTTATCAAATGCAAGGGTGTTCTAAGAGGCGGCGCAGAGGTGGCAGTGAAGCGAATATCACAAGAGAATGACGGCGTGAGAGAGTTCCTAGCAGAAATTTCAAGCCTTGGAAGATTGAAGCAGAGAAACTTGGTTGCTCTGAGAGGATGGTGCAAGAAAGACATGGGAAATTTCTTGTTAGTTTATGAATACATGGATAAGAGAGTGTTTTGTGATGAGAGCATGATGCTGAACTGTGAAGAGAGAATAAGAATCATCAAAGGTGTGGCCTTTGCTGTGTTGTATTTGCATGAAGGTTGGGAAGAACAAGTTCTGCATAGGGACATCAAAGCCAGCAATGTGTTACTTGATAAGGATATGAATGGAAAGCTTGGAGACTTTGGATTAGCAAGAATGAATAGCCATGGCCAAGTTGCTAGCACAACAAACTATTGCAAATCAAGCAAGGTGCTGTTGCAAAATGGGAGTTGTCAGTGGTCAGATAAACACATTGAAATTATAAACACATAA 963 0.4268 ASWDSPKLTRSCSNVERRDVLGNTIHQFPDSKSQSFENLQELTAGKVAANLESPRSVMTHCSADRVMLRRHFSSHVLPSGSKRLWWKMFLWSHRNIHRPISSKSTQVNPGVAVTHNPYGYSSDTLEPKHKQSPGNVEWLFSYNIESLRLECLIKCKGVLRGGAEVAVKRISQENDGVREFLAEISSLGRLKQRNLVALRGWCKKDMGNFLLVYEYMDKRVFCDESMMLNCEERIRIIKGVAFAVLYLHEGWEEQVLHRDIKASNVLLDKDMNGKLGDFGLARMNSHGQVASTTNYCKSSKVLLQNGSCQWSDKHIEIINT* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0147 320 Gene3D Phosphorylase Kinase; domain 1 154 215 - -
Amo17g0147 320 SMART serkin_6 147 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0147 320 SUPERFAMILY Protein kinase-like (PK-like) 155 295 IPR011009 -
Amo17g0147 320 PANTHER - 156 294 - -
Amo17g0147 320 Pfam Protein kinase domain 161 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0147 320 Gene3D Transferase(Phosphotransferase) domain 1 216 307 - -
Amo17g0147 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Amo17g0147 320 ProSiteProfiles Protein kinase domain profile. 125 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0147 320 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 156 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0147 Amo-Chr17 2047998 2050966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0147 156 302 Receptor kinase-like Gene Family AT4G04960 62.821 4.02e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo17g0147 Pkinase 9.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0147 - - ahf:112762724 585.489