Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0117 ATGGAACTCCACAACAACATTCCAATGTTCATCCTTCTAGTCTTCATGATGATGATCACAAGTAATGGTGGTGCTGCTGCAAATGTTCCAGCAATAATTGTGTTTGGTGATTCATCAGTGGATGCAGGGAACAACAACTTCATTCCAACAATTGCTAGGAGCAATTTCCAGCCATATGGACGTGACTTTGAAGGTGGGGTTGCAACTGGGAGGTTCAGCAATGGAAGAATACCCACTGATTTCATTTCTGAGGCTTTTGGACTCAAACAATTTGTGCCTGCTTACTTGGATCCTAAGTACAATATTACTGATTTTGCCACTGGTGTCACTTTTGCTTCTGCTGCCACTGGTTATGACAATGCAACCTCTGATGTTTTGTCTGTGATACCATTATGGAAGCAATTGGAGTACTACAAGGAATATCAACAAAAGCTAATCACATATGTTGGTGAAACAAAGGCACATGAAATCATATCAGAATCACTATACATAATGAGTCTAGGAACAAATGATTTCTTAGAAAACTATTACACCATGCCAGGTGGCAGAGAATCTGAATACACACCACAGCAATACCAAAACTTTCTTGCTTCAATTGCTGGGAATTTCATCAGAAATCTCTATGCAACTGGTGCTAGGAAGATATCACTAGGTGGGTTACCTCCAATGGGGTGCTTGCCATTGGAGAGAACCACAAACATTGTTGGTGGAAATGATTGTGTTGCAAGTTACAATAATGTTGCATTGGAGTTCAATGATAAGCTCAGGAATTTGGCCATTAATCTCAACAAGGAACTTCCTGGGATCAGATTGGTCTTCTCTAACCCTTATTACATCTTGTTGTATATGATCAAGAAGCCTTCTACATTTGGGTTTCAATCAACATCAGTGGCATGTTGTGGGACTGGAATGTTTGAAATGGGATATGCATGCAGCAGAGGAGACAGGTTTAGTTGCTCAGATGCCACCAAATATGTCTTCTGGGATGCTTTTCATCCAACTGAGAGAACCAATAGCATTGTTGCTGATTATGTGGTTAAGCATGTTTTAGCTCAGTTCTTAAAATAA 1068 0.4007 MELHNNIPMFILLVFMMMITSNGGAAANVPAIIVFGDSSVDAGNNNFIPTIARSNFQPYGRDFEGGVATGRFSNGRIPTDFISEAFGLKQFVPAYLDPKYNITDFATGVTFASAATGYDNATSDVLSVIPLWKQLEYYKEYQQKLITYVGETKAHEIISESLYIMSLGTNDFLENYYTMPGGRESEYTPQQYQNFLASIAGNFIRNLYATGARKISLGGLPPMGCLPLERTTNIVGGNDCVASYNNVALEFNDKLRNLAINLNKELPGIRLVFSNPYYILLYMIKKPSTFGFQSTSVACCGTGMFEMGYACSRGDRFSCSDATKYVFWDAFHPTERTNSIVADYVVKHVLAQFLK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0117 355 Pfam GDSL-like Lipase/Acylhydrolase 32 345 IPR001087 GO:0016788
Amo17g0117 355 PANTHER GDSL ESTERASE/LIPASE EXL3 11 353 - -
Amo17g0117 355 SUPERFAMILY SGNH hydrolase 32 350 - -
Amo17g0117 355 CDD SGNH_plant_lipase_like 30 345 IPR035669 -
Amo17g0117 355 Gene3D SGNH hydrolase 20 352 IPR036514 -
Amo17g0117 355 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0117 Amo-Chr17 1501917 1505620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0117 29 349 Acyl Lipid Metabolism Gene Families AT4G10950 35.802 3.20e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0117 - - gmx:100804416 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0117 17 1501917 1505620 Amo07g0554 07 6559655 6565190 hybridization