Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0076 ATGGAGTTACCATGTTTTTTGAGTTTTAGGGGAGCAGACACAAGAAAAGGCTTCACAAACCACTTGTATTCTGCTTTAAAGGATGCTGGGATCATAGTTTTCAGAGATGACAAGATTCTTGAAGTTGGAGATGTCATATCAGAAGAACTTCCAAGAGCAATCAAGGACTCACTCTCTGCCATTGTTATCCTCTCACCAAAATATGCTACTTCCACTTGGTGCTTGGAGGAGCTTCACTGCATTCTTGAGTCCAAACTTGAAGTTTTCCCAATCTTCTATGATGTGGAAGCATCAGATGTTAGATACCAAAAGGGAAGTTTTGCTGAGGCCTTTGAGAAACATGAGAAGAGGTATGATGGAGATAAGGTTCAAAAATGGAGAGATGCCTTAACACAAGTWGCTGGTTTAAGTGGTTGGGGCTCCAAAAAAAGGTTGGAAGCAGAACTAATTGAAGAAATTGTCACAACTGTTTGGACAAGGCTGCAACCTAAATTGCCAACATTTAGGGATGGATTGGTTGGAATTGATAAGAAGKTAGAAGACATGAACTCACTTTTAAGACCAGATGTAAAGGATGTTCGCTTTATAGGCATATGGGGCATGGGAGGCATAGGAAAGACAACTCTTGCTAAAGTCTTGTATATGAAAATTCGAAGAAAATTCGAAATTAGTTGCACCCTTGACAATGTTAGAGAAGCTTCCGGTCAAAGACATGGCCTGCTAAACTTGCAAAGAGAACTTCTTAGTAAGCTGAAAATTATGGACACAAAGATAGAAGATGAGTATCAAGGAATAGACACTATTAGAAACTTTCTCTTCAATAAAAAGGTTCTACTTYTTCTTGATGATGTAAGTGATATGAGCCAATTAGAGAATTTAGCAGAAAAGGAATGGTTTGGTCCAGGGAGTAGAGTAATAGTGACTACAAGAGACATGCAACTGTTGACGTCTCATGGAATATCAGAAAAGTATGAGATTGATTTCTTGAACCATGAAGAATCCCTTCAACTCTTTTCAAGGAAAGCCTTTAAGAGAGATGAACCTCCAGAGCATTTTCTGAAGCTGTCGAAAGCCGTGATCAAATATGCTGGAGGCCTTCCTTTGACACTCAAGCTTCTCGGCTCACTTCTTTGCGAACGAAGTGTGTCACAATGGAAGGAGGTTTTGGAACAGATAAAAGAAGTTCCTGAGAGTGATAGTCTTCATAGGACACTTGGAATAAGCTATGATGGACTACCGAGGCGATATAAAGGACTATTTCTAGACATTGCTTGTTTCTTCAAAGGGTGGACTAAAGATCAAGTGAAACAAATACTGAATGATTGCGGCCGTTATCCTCCAATTGGAATCGAAATTCTTATTGAAAAATCACTGGTAACTTATGATTCAGGGGTTCTGGGGATGCATGATTCACTTCAAGACATGGGAAGGAGTATTGTCTTTGAAGAATCTCCTGAAATTGCTGGTAAACGTAGCAGGTTGTGGTCTTTGGATGACATTGATCACGTGCTAAGAAAAAATAAGGTAAATGAATCAACACAAGGCATAGTACTTGAATTATGGCATTTGCATCATGAAGCTCGCTGGCACCCTGAAGGGTTCTCAAATATGGAGATCCTTAGACTACTTATCTTGTCAAGTAACTTGCACCTTCCACTTGGCCTAAAATGTCTATCTAGTGGATTAAAAGTCCTTGTATGGAGGGAKTGTCCCTTAAACGCTTTACCACTTGGAGTCCCTCTGGATGAACTCGTTCGCCTCYAAATGCCTCACAGCAATCTAAAACAACTTTGGAACGGAATGCAGTACTTTGCTAAGATGAAATCCATCTATTTAAGTCATTCTCTAAGCCTGACTAGCACTCCAGATTTTACCGGAATCCCCAATCTGGAAATACTGTATCTTGATGAATGCATAAACCTGTTTGAGGTTCATCCATCTCTTGGAAAGCACAGAAAGCTTGTCAAAGTGTCATTAGCTGACTGCAGAAATCTCAAGAAACTTCCAAGAAAATTGGAAATGGAATCTCTGAAGTGCTTAGACCTCCATGGCTGCACAAATGTCAGAAAGCTTCCTGAGTTTGGGGAAAATATGATACATCTAGAGGAGCTCGATTTGCGCAACATCGCCATAGCAGAATTGCCTCCTTCTCTTGGTCATGTAACTGCTCTTCGCACTTTGAATTTAGAGAGTTGTCAAAATCTCATTTGCTTGCCAAAAACTTTTGGCAATTTGAAATCTCTTACAAAGCTCAATATCTGCTGTTGCTCAAACTTCTCTAAGCTGCCGGAGAATTTAAATGAAAATGAAGCATTAGAATATCTTAATGCAAGTTTAACTGCATTAAGAGAAATACCTTCTTCTATTGTTCATTTGAAGAATCTTATGTGGCTCATTATAGCTGGATGTAAAGTTCAGGAAACTTCCAACTCATGGAACATCATTCAACCAATAGCACAGATATTCGGCTTCAAGAGTTATCATCCACCGATTTCAATGAGCTTGGTGTTGCCTCCTTCTATATCAGGTATGAGAATGTTGAAGGAATTGATTGCCAAAGCCTTGTGTCATTGCCTGATCTTCCACCAAATGCAGCACATGTTTACTTGTACAATTGTCCTCGCCTCGAGTCATTGCCTAAGCTTCCACCAACGGTGCAGCGAGTAG 2667 0.3986 MELPCFLSFRGADTRKGFTNHLYSALKDAGIIVFRDDKILEVGDVISEELPRAIKDSLSAIVILSPKYATSTWCLEELHCILESKLEVFPIFYDVEASDVRYQKGSFAEAFEKHEKRYDGDKVQKWRDALTQVAGLSGWGSKKRLEAELIEEIVTTVWTRLQPKLPTFRDGLVGIDKKXEDMNSLLRPDVKDVRFIGIWGMGGIGKTTLAKVLYMKIRRKFEISCTLDNVREASGQRHGLLNLQRELLSKLKIMDTKIEDEYQGIDTIRNFLFNKKVLLXLDDVSDMSQLENLAEKEWFGPGSRVIVTTRDMQLLTSHGISEKYEIDFLNHEESLQLFSRKAFKRDEPPEHFLKLSKAVIKYAGGLPLTLKLLGSLLCERSVSQWKEVLEQIKEVPESDSLHRTLGISYDGLPRRYKGLFLDIACFFKGWTKDQVKQILNDCGRYPPIGIEILIEKSLVTYDSGVLGMHDSLQDMGRSIVFEESPEIAGKRSRLWSLDDIDHVLRKNKVNESTQGIVLELWHLHHEARWHPEGFSNMEILRLLILSSNLHLPLGLKCLSSGLKVLVWRXCPLNALPLGVPLDELVRLXMPHSNLKQLWNGMQYFAKMKSIYLSHSLSLTSTPDFTGIPNLEILYLDECINLFEVHPSLGKHRKLVKVSLADCRNLKKLPRKLEMESLKCLDLHGCTNVRKLPEFGENMIHLEELDLRNIAIAELPPSLGHVTALRTLNLESCQNLICLPKTFGNLKSLTKLNICCCSNFSKLPENLNENEALEYLNASLTALREIPSSIVHLKNLMWLIIAGCKVQETSNSWNIIQPIAQIFGFKSYHPPISMSLVLPPSISGMRMLKELIAKALCHCLIFHQMQHMFTCTIVLASSHCLSFHQRCSE* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0076 888 Gene3D - 2 162 IPR035897 -
Amo17g0076 888 SUPERFAMILY L domain-like 468 849 - -
Amo17g0076 888 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 691 IPR044974 GO:0006952
Amo17g0076 888 Gene3D - 328 413 IPR042197 -
Amo17g0076 888 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 139 IPR035897 -
Amo17g0076 888 Pfam NB-ARC domain 183 394 IPR002182 GO:0043531
Amo17g0076 888 PANTHER TMV RESISTANCE PROTEIN N-LIKE 9 691 - -
Amo17g0076 888 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 423 IPR027417 -
Amo17g0076 888 PANTHER TMV RESISTANCE PROTEIN N-LIKE 689 808 - -
Amo17g0076 888 Gene3D Ribonuclease Inhibitor 696 881 IPR032675 -
Amo17g0076 888 Gene3D Ribonuclease Inhibitor 497 695 IPR032675 -
Amo17g0076 888 Gene3D - 163 324 IPR027417 -
Amo17g0076 888 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 689 808 IPR044974 GO:0006952
Amo17g0076 888 SMART till_3 2 136 IPR000157 GO:0007165
Amo17g0076 888 PRINTS Disease resistance protein signature 363 377 - -
Amo17g0076 888 PRINTS Disease resistance protein signature 271 285 - -
Amo17g0076 888 PRINTS Disease resistance protein signature 672 688 - -
Amo17g0076 888 PRINTS Disease resistance protein signature 195 210 - -
Amo17g0076 888 Pfam TIR domain 5 167 IPR000157 GO:0007165
Amo17g0076 888 ProSiteProfiles TIR domain profile. 1 161 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0076 Amo-Chr17 903777 907767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0076 10 820 WRKY Transcription Factor Family AT4G12020 31.548 1.73e-94 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0076 - - adu:107496788 1613.2