Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0074 ATGGCCACAACCTCCATACTCTTCTCCTTCTTGTTCTTGTTCCTTATCAGTAGTACCTTAACAGAAGGGCAACAGATATACCTGAACAACGACCAACTAACATGCGACACCATAACCAACTCAACCTTAGGCAACACCTGCAACTCCATCGCAACCTGCCAATCCTACCTCACTTTCATATCCGCCACAAAACACAACACAGCCTCCACAATCTCCACCCTCCTCAACTCCACACCCACCAACATAACCACCTCCAACAACCTCTCAACCGTCTCTGAAGTCATCCCAACCGACACCCTCATCACCATCCCCGTCACGTGCTCATGCTTCAACAAAACCTATTACCAGCACAACACCACCTACACTATCTCCGCCGACGACACCTACTTCAGCCTCGCCAACAACACCTTCGAGGCACTCACCACGTGTCAAGCTCTCATTGCTCAGAACCCTTCTTTCCCCGAACGAAACCTTCAAGCCGGTGAGCGTGTCCACGTGCCTCTCAGGTGCGCGTGTCCCACCAAAAAACAGCGTGATGCTGGCTTCAAGTACTTGCTCACTTACTTGGTTTCCATGGGGGAATCGATTTCTTCCATTGCTGAGATCTTCGGGGTTGATGTACAGAGCGTTTTGGATGCTAATGAGCTTTCTGAAAGTTCGGTTATCTACTACTTTACTCCGATCTCTGTTCCTCTCAAAACAGAGCCGCCAAAGAAGTTGCAGAGGGTGGCTCAGCCGCCGGAGTCACCGCCGCCACCGGTGGAGACTACTCCGCCAAGCGGTGGCTCCGGGAATTCAAAGAAATGGGTGGTTGTTGGTGTTGTAATTGGGGTTGTCGTTCTGCTTCTTGTTCTAGGTTTTGTTCTGTTTTTCATATGCTTCCGCCGCCGTACACGGCAGCCGGAAACGGCGGAGGAGGCGGCAAAGGCGAAGCCTTTCTATGACTCTACCAGCACTGAAGAAGTCAAAAAGGGTTCTTTGGATGTTGTTACTACTACAACTAGCACCTCTACTACTCAATCATGGTCTATTTCTTCTGCAGGTGTACGCTATGCAATTGAGTCTTTAACGGTTTACAGATTTGAGGAGTTGCAGAAAGCTACCGGATTCTTCGGTGAGGATAATAGAATCAAGGGATCTTCTGTTTATAGAGCTTCTTTTAAAGGTGATGATGCTGCTGTTAAGGTTCTCAAAGGTGATGTTTCTGCTGAGATCAACATTCTCAAGATGATCAATCACACCAATGTTACAAGATTGTCTGGTTTTTGTGTCCACAAAGGTAACACTTATCTTGTTTATGAGTTTGCTGAGAATGGTGATCTTGATGATTGGCTTCATAATCATGGTAACAAGAAGAAAGATTTGGGCTTGAGTTGGAAGCAAAGGGTTCAGGTTGCTCATGATGTTGCTGATGCACTTAACTATCTTCACAACTATACAAACCCTTCTCATGTTCATAAGAATTTGAAGAGTGGTAATATTCTATTGGATGGTAATTTTAGGGCTAAAGTTTCAAACTTTGGGCTTGCAAGAGCCGTTGAGGATCAAGGTGATGATGGGGATGGAGGGTTCCAATTGACAAGGCATGTTGTTGGGACACAAGGTTATATGCCAGCTGAGTACATTGAGAATGGAGTGATCACACCAAAGATGGATGTTTTTGCATTTGGGGTTGTGATTTTGGAGCTTCTTTCAGGAAGAGAAGCTGTTGGATTTGGTGAGGATCGCCAAGTGTTGTTGTCATCAACTATAGGGCAAGTTCTTGAAGGAGATAATGTTAGGGAGAATCTTAGAGAATTCATGGATCCTTCTTTGGAGGGTGTTTATCCTTTGGATTTGGCATATTCTATGGCTGAATTGGCCAAAAAGTGTGTTGCCCGTGACATCAATTCAAGACCAAACATCTCTGAGGTTTTCATGACTTTGTCTAAGATTCAATCATCTACATTGAATTGGGATCCCTCTGATGAGCTTGAACGGTTTAAATCAGTTAGCCAAATGTCTGATACTGATAGCTGA 2019 0.4532 MATTSILFSFLFLFLISSTLTEGQQIYLNNDQLTCDTITNSTLGNTCNSIATCQSYLTFISATKHNTASTISTLLNSTPTNITTSNNLSTVSEVIPTDTLITIPVTCSCFNKTYYQHNTTYTISADDTYFSLANNTFEALTTCQALIAQNPSFPERNLQAGERVHVPLRCACPTKKQRDAGFKYLLTYLVSMGESISSIAEIFGVDVQSVLDANELSESSVIYYFTPISVPLKTEPPKKLQRVAQPPESPPPPVETTPPSGGSGNSKKWVVVGVVIGVVVLLLVLGFVLFFICFRRRTRQPETAEEAAKAKPFYDSTSTEEVKKGSLDVVTTTTSTSTTQSWSISSAGVRYAIESLTVYRFEELQKATGFFGEDNRIKGSSVYRASFKGDDAAVKVLKGDVSAEINILKMINHTNVTRLSGFCVHKGNTYLVYEFAENGDLDDWLHNHGNKKKDLGLSWKQRVQVAHDVADALNYLHNYTNPSHVHKNLKSGNILLDGNFRAKVSNFGLARAVEDQGDDGDGGFQLTRHVVGTQGYMPAEYIENGVITPKMDVFAFGVVILELLSGREAVGFGEDRQVLLSSTIGQVLEGDNVRENLREFMDPSLEGVYPLDLAYSMAELAKKCVARDINSRPNISEVFMTLSKIQSSTLNWDPSDELERFKSVSQMSDTDS* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0074 672 MobiDBLite consensus disorder prediction 243 258 - -
Amo17g0074 672 ProSiteProfiles LysM domain profile. 186 230 IPR018392 -
Amo17g0074 672 Pfam Protein kinase domain 399 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0074 672 SMART LysM_2 187 231 IPR018392 -
Amo17g0074 672 SMART LysM_2 120 167 IPR018392 -
Amo17g0074 672 Gene3D LysM domain 186 245 IPR036779 -
Amo17g0074 672 CDD LysM 187 223 IPR018392 -
Amo17g0074 672 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 662 - -
Amo17g0074 672 SUPERFAMILY Protein kinase-like (PK-like) 347 639 IPR011009 -
Amo17g0074 672 Gene3D Phosphorylase Kinase; domain 1 330 435 - -
Amo17g0074 672 Pfam LysM domain 188 231 IPR018392 -
Amo17g0074 672 PANTHER PROTEIN LYK5 13 662 - -
Amo17g0074 672 ProSiteProfiles Protein kinase domain profile. 316 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0074 672 MobiDBLite consensus disorder prediction 236 264 - -
Amo17g0074 672 Gene3D Transferase(Phosphotransferase) domain 1 436 664 - -
Amo17g0074 672 ProSiteProfiles LysM domain profile. 119 166 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0074 Amo-Chr17 895396 897785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0074 10 664 Receptor kinase-like Gene Family AT2G33580 50.733 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo17g0074 Pkinase 3.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0074 - - adu:107496800 1190.64