Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0063 ATGAAACAACCCAGATTCATATTTTCATCATTTTTCTTCCTCTTGGTGGTGGTAGATTTTGTAATTCTACCCATCAATGCAGAGTCAAAGTGTAGTGAGAGTTGTGGCTTAGCTTTAGCTTCCTACTATCTTTGGGATAATTCTAACCTCACATATATTGCAACTGTTATGAAATCAGAGTATGTTACAAGGTCACAAGGTGAAGATATTGTGAGCTACAACAATGGCACCATAAAAAGCAAAGACTCAGTCACATCCTCCACCAGAATCAATGTTCCATTCCCTTGTGAATGCATCAATGGTGAGTTTCTTGGCCATGTATTTCAATACTCAGTTTTGAGCAGTGACACCTACGATACCATTGCAAATTGGAGCTATTCAAACTTGGTCACTGCTGAGCATGAGGATTCTTTGGAGTCAATTGCAAACAAGACAAAGATTGATGCTAAGTTGCTGCAGGGATATAACCCTGGTGTGAATTTCAGCAAAGGGAGTGGTCTGGTTTATATTCCTGGGAAAGGGAAGGGTCTATCCGGTGGCGTTATTGGTGGAATATCTGTTGGAATAGTAGCAGCACTTCTGTTATTGGTATTTTGTGTTTATGTTAAATGTTACAGAAGAAAGAAGATGTGGAACAAAAAATTGGTAGCTAAAGATTCCAGCGAGAACTTTGTTCGCCAAGGCGAAACCTCTCATAATGCTGAAAACAGAACTTCAGCTTCTGATGATACTAGTATTATAGGTGTTAAGGTAGAAAAATCAGCAGAGTTTTCGTATGAAGAACTAGCCAATGCCACAAATAACTTCAGTTTGGCTAAAAAGATTGGTCAAGGTGGTTTTGGTGAAGTCTATTATGGAGAGCTCAATGGCGAGAGAGCTGCAATTAAGAAGATGGACATGAAAGCATCAAAAGAATTTCTCGCGGAACTGAAAGTGTTGACGCGTGTTCATCACTTAAACTTGGTACGCTTGATTGGATATTGTGTCGAGGGCTCTCTTTTCCTTGTGTATGAATATATTGAAAATGGAAACTTAAGCCAACATCTGCGAAATTCAGATAGTGAGCCTTTGCCATGGTCTACCCGGGTTCAAATTGCTCTGGACTCGGCCAGAGGACTTGAATACATTCATGAGCATACGATGCCTGTATATATCCATCGCGATGTAAAGTCGGAAAATATTTTATTAGACAGAAACTTCCGTGGAAAGGTTGCGGATTTTGGACTGACCAAGCTGATTGATGTTGGAAATTCATCAGCTCCAACTGCTAATATGGCCGGCACATTCGGCTACATGCCACCAGAATATGTATATGGAAGTGTTTCTCCCAAAATAGATGTATATGCTTTCGGAGTTGTTCTTTATGAGCTTATTTCTGCAAAAGAAGCTCTGATGAGGAGTGGTGGTGCATCTGGTGCTGAATTGAAGGGCCTTGTGGCTTTGTTTGAGGAAGTTTTTAACCAGCCAGACCCCAAAGAAGGTCTTAAACAAATGGTGGATCCTAGGCTTGGAGATAACTATTCAATTGAATCAGTTTATAAGATGGCACAACTTGCCAAGGCATGTACAGAGGGAGATCCGCAGCGGCGGCCGAAGATGAGATCGGTGGTGGTTGCTCTTATGACACTAAGTTCAACCACTGAGAATTGGGACATTGCTTCCTTTTATGAAAATCCAGCTCTTGTAAATCTTATGTCTGAATCAAAGTGTAGCAAGAGCTGTGACTTAGCTTTTGCTTCTTACTATCTTTGGAACAATGATTCTAGCCTGCTATATATTTCACACATCATGCAATCCAATCTTCTTCACAAAGTTGAAGATATTGTTAGATACAACAAAGACACCTCATATCCATCACATACCAGAGTTAATGTTCCAATACCTTGTGATTGCATCAATGATGGAGAGTTTCTGGGCCACACATTCCAGTACTCAGTTACTCGAGGCGACGACTACTTAACCATTGCCAATGGGACTTTTTCCAACTTGGTCACAGCAGAGTGGCTGCAGAACACTAACAGCTATTCACAAGATGCTATTCCGGCCGGTGGAAAGGTTAATGTGACAGTTAACTGTTCTTGTGGAGACAGTAATATTAGCAAACATTATGGATTGTTCATCACATACCCTCTTAGGCCTGAGGATTCTTTGCAGTCAATTGCAAACCAGACAAAGCTTGATCCTGAGTTGTTGATGAAATACAACCCCAGTGTAAATTTCAGCAAAGGGAATGGTCTGATGAAAACGGCAACTATGCGCCTCTTCGCCCAAGGTCTACCAGATAGGATTGTTGCTGGAATATCTGTTGGAGTTGTAGCAGTAGTTCTGTTATTAGCATTTTGTGTTTGTATTAAATGTTGCGGAAGGAAGAAGAAGAAACTGAGAACAGAATATTTCGGTCAGAACACTACTCGAGCTAGGGAAGATAAAGCCTCTGATAGCTTTGTAAACACAAGTGTGGAAAAATCAGCAGAGTTTTCATATGAAGAACTGGCCCATGCCACAAATAACTTCAGTTTGGCTAACAAAATTGGCCAAGGTGGTTTTGGAGAAATCTATTATGCAGAGCTGAATGACAAGAAAGCTGCAATAAAGAAGATGGACATGAAAGCATCAAAAGAATTTCTTGCAGAACTGAAAGTGTTGACACATGTTCAGCACTTAAACCTGGTCCATTTAATTGGATATTGTGTTAAGGACTTCCTTTTCCTTGTGTATGAATATATCGACAATGGAAACTTAAGTGAACATCTACGAAATTCAGATAGAGAACCTTTGCCATGGTCCACCCGGATTCAAATAGCTCTGGATTCAGCCAGGGGACTTGAATATATTCATGAACATACAAAGCCTGTATATATCCATCGCGATATAAAGTCTTCCAATATATTATTAGACAAATCCTTCCATGGAAAGGTTGCGGATTTCGGACTAGCAAAGCTGATTGATACTGGAAGTTCATCAGCTCCCACTGCTAATATGGCAGGCACATTTGGTTACATGCCACCAGAGTATGTATATGGCAGAGTTTCTCCTAAATTAGATGTCTTTGCTTTTGGGGTTGTCCTTTATGAGCTTATTTCTGCTAAAGAAGCTGTGATCAATGGTGGTGCTGAAATCAAGGGCCTTGTAGCTTTGTTTCATGAAGTTTTTGATCAACCAGACCCTAAAGAAGGTCTTAAAGAACTGGTGGATCCTAGGCTTGGAGAAAATTACTCAATTGATTCAGTTTTCAAGATGGCACAACTAGCCAATGCATGTACAGAGAGGGATCCGAAGCGGCGTCCGAAGATGAGATCGGTGGTGGTTGCTCTTATGACACTTGGTTCAGGCACTGAGAATTGGGACATTGCTTCCTTCTATGAAAATCCAGCTCTTGTGAATCTAATGTCTGGTGACAGTGTAGAGAAATCAGCAAAGTTCTCATATGAAGAACTAGCCAATGCCACAGATAACTTCAGTTTGGCAAACAAAATTGGTCAAGGTGGTTTTGCGGAAATATATTATGCAGAGCTGAATGGCGAGAGAGCTGCAATAAAAAAGATGGACAAGACAGCATCAAAAGAGTTTCTTGCAGAACTGAAAGTGTTGACTCGTGTTCATCACTTAAACCTGGTACGGTTGATTGGATATTGCATTAAGGGCTCTCTTTTCCTTGTTTATGAATACATTGACAATGGAAACTTGAGCCAACATCTACAAGATTCAGATAGAAAACCTTTGTCGTGGTCAGACCGGATTCAAATAGCTCTCGATTCAGCCAGAGGACTTGAATATATTCATGAATGTACAACGCCTGTATACATACATCGCGACATAAAATCAGCAAATATTTTAATAGACAAATTCTTCCATGGAAAGGTGGCAGATTTTGGACTAGCAAAGTTGATTGATGTAGGAAGTTCATCAGTTCCCACTGATAAAATGGCAGGCACATTTGGTTACATGCCACCAGAGTACATATTTGGGAATGTTTCTCCTAAAGTAGATGTCTATGCTTTTGGAGTTGTTCTTTATGAGCTTATTTCTGCTAAAGAAGCTGTGATCAAGGATGGTGATGAAATTAAAAGCCTTGTAGCTTTGTTTAATGAAGTTTTTGAGCAGCCAGATCCAAATGGTGGTCTTAAAAAACTAGTGGATCCTAGGCTTGGAGATAATTACTCAGTTGATTCAGTTTTCAAGGTACTACTTATGATTATAGAATTTAAGCTTCTTTTGGTGTTTCTGATTTCAACAGCTATGACTATTAGTCTACTTTCCAGATGGCACAACTTGCCAAGGCATGCACCGAGAGAGATCCGCGGCAGCGTCCGAAGATGA 4320 0.4032 MKQPRFIFSSFFFLLVVVDFVILPINAESKCSESCGLALASYYLWDNSNLTYIATVMKSEYVTRSQGEDIVSYNNGTIKSKDSVTSSTRINVPFPCECINGEFLGHVFQYSVLSSDTYDTIANWSYSNLVTAEHEDSLESIANKTKIDAKLLQGYNPGVNFSKGSGLVYIPGKGKGLSGGVIGGISVGIVAALLLLVFCVYVKCYRRKKMWNKKLVAKDSSENFVRQGETSHNAENRTSASDDTSIIGVKVEKSAEFSYEELANATNNFSLAKKIGQGGFGEVYYGELNGERAAIKKMDMKASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRNSDSEPLPWSTRVQIALDSARGLEYIHEHTMPVYIHRDVKSENILLDRNFRGKVADFGLTKLIDVGNSSAPTANMAGTFGYMPPEYVYGSVSPKIDVYAFGVVLYELISAKEALMRSGGASGAELKGLVALFEEVFNQPDPKEGLKQMVDPRLGDNYSIESVYKMAQLAKACTEGDPQRRPKMRSVVVALMTLSSTTENWDIASFYENPALVNLMSESKCSKSCDLAFASYYLWNNDSSLLYISHIMQSNLLHKVEDIVRYNKDTSYPSHTRVNVPIPCDCINDGEFLGHTFQYSVTRGDDYLTIANGTFSNLVTAEWLQNTNSYSQDAIPAGGKVNVTVNCSCGDSNISKHYGLFITYPLRPEDSLQSIANQTKLDPELLMKYNPSVNFSKGNGLMKTATMRLFAQGLPDRIVAGISVGVVAVVLLLAFCVCIKCCGRKKKKLRTEYFGQNTTRAREDKASDSFVNTSVEKSAEFSYEELAHATNNFSLANKIGQGGFGEIYYAELNDKKAAIKKMDMKASKEFLAELKVLTHVQHLNLVHLIGYCVKDFLFLVYEYIDNGNLSEHLRNSDREPLPWSTRIQIALDSARGLEYIHEHTKPVYIHRDIKSSNILLDKSFHGKVADFGLAKLIDTGSSSAPTANMAGTFGYMPPEYVYGRVSPKLDVFAFGVVLYELISAKEAVINGGAEIKGLVALFHEVFDQPDPKEGLKELVDPRLGENYSIDSVFKMAQLANACTERDPKRRPKMRSVVVALMTLGSGTENWDIASFYENPALVNLMSGDSVEKSAKFSYEELANATDNFSLANKIGQGGFAEIYYAELNGERAAIKKMDKTASKEFLAELKVLTRVHHLNLVRLIGYCIKGSLFLVYEYIDNGNLSQHLQDSDRKPLSWSDRIQIALDSARGLEYIHECTTPVYIHRDIKSANILIDKFFHGKVADFGLAKLIDVGSSSVPTDKMAGTFGYMPPEYIFGNVSPKVDVYAFGVVLYELISAKEAVIKDGDEIKSLVALFNEVFEQPDPNGGLKKLVDPRLGDNYSVDSVFKVLLMIIEFKLLLVFLISTAMTISLLSRWHNLPRHAPREIRGSVRR* 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0063 1439 Gene3D Phosphorylase Kinase; domain 1 240 339 - -
Amo17g0063 1439 Gene3D Phosphorylase Kinase; domain 1 1128 1223 - -
Amo17g0063 1439 Gene3D Phosphorylase Kinase; domain 1 808 908 - -
Amo17g0063 1439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672|GO:0006468
Amo17g0063 1439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 953 965 IPR008271 GO:0004672|GO:0006468
Amo17g0063 1439 ProSitePatterns Protein kinases ATP-binding region signature. 844 866 IPR017441 GO:0005524
Amo17g0063 1439 Gene3D Transferase(Phosphotransferase) domain 1 340 558 - -
Amo17g0063 1439 Gene3D Transferase(Phosphotransferase) domain 1 909 1119 - -
Amo17g0063 1439 Gene3D Transferase(Phosphotransferase) domain 1 1224 1403 - -
Amo17g0063 1439 CDD STKc_IRAK 275 537 - -
Amo17g0063 1439 ProSiteProfiles Protein kinase domain profile. 838 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0063 1439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1268 1280 IPR008271 GO:0004672|GO:0006468
Amo17g0063 1439 ProSiteProfiles Protein kinase domain profile. 1153 1439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0063 1439 ProSiteProfiles Protein kinase domain profile. 269 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0063 1439 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Amo17g0063 1439 SUPERFAMILY Protein kinase-like (PK-like) 251 540 IPR011009 -
Amo17g0063 1439 ProSitePatterns Protein kinases ATP-binding region signature. 1159 1181 IPR017441 GO:0005524
Amo17g0063 1439 PANTHER LYSM RECEPTOR KINASE 1B 134 566 - -
Amo17g0063 1439 PANTHER LYSM RECEPTOR KINASE 1B 17 133 - -
Amo17g0063 1439 CDD STKc_IRAK 844 1102 - -
Amo17g0063 1439 SUPERFAMILY Protein kinase-like (PK-like) 814 1105 IPR011009 -
Amo17g0063 1439 SMART serkin_6 269 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0063 1439 SMART serkin_6 1153 1409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0063 1439 SMART serkin_6 838 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g0063 1439 PANTHER LYSM RECEPTOR KINASE 1B 567 1132 - -
Amo17g0063 1439 PANTHER LYSM RECEPTOR KINASE 1B 1135 1395 - -
Amo17g0063 1439 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 134 566 IPR044812 GO:0019199|GO:0045087
Amo17g0063 1439 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 567 1132 IPR044812 GO:0019199|GO:0045087
Amo17g0063 1439 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1135 1395 IPR044812 GO:0019199|GO:0045087
Amo17g0063 1439 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 17 133 IPR044812 GO:0019199|GO:0045087
Amo17g0063 1439 SUPERFAMILY Protein kinase-like (PK-like) 1137 1369 IPR011009 -
Amo17g0063 1439 Pfam Protein tyrosine and serine/threonine kinase 270 539 IPR001245 GO:0004672|GO:0006468
Amo17g0063 1439 Pfam Protein tyrosine and serine/threonine kinase 840 1104 IPR001245 GO:0004672|GO:0006468
Amo17g0063 1439 Pfam Protein tyrosine and serine/threonine kinase 1155 1351 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0063 Amo-Chr17 715263 737062 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0063 4 566 Receptor kinase-like Gene Family AT3G21630 51.364 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo17g0063 PK_Tyr_Ser-Thr 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0063 - K13429 gmx:100803042 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0063 17 715263 737062 Amo17g0063 17 715263 737062 ECH