Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0058 ATGGGTCATCAGGGACATGTTCTGACGACGAAACCAGAACATCTTAGGAGGAAACTGGAGACAAAAGTTGAGCAAGTACAAGAACAGGTAAAGAACACAGTTCAAGTTGATAGAATTGAAGGCGGTTGTTTTATGCAGTTTGACTTTGAATCAAGACAAAGCACTTTCAATGGAATCTTGGAAGCCTTACAAGATGATAGCATCTCCAGTGTGGCAGTGTACGGCATGGGTGGAGTAGGAAAGACAACCTTAGCAAGGCATGTAGGTAAAAGAGTAAAGGAGATGAACATGTTTGACCTTGTTCTACCTGTTCATGTGACGACAGCTGAAAATGTCAAGAGGATTCAAGGTGACATAGCTGCCGGGTTAGGACTTCGATTGGGAGAGGAATCCGATCTAGCTGAAAGACAGAGACAACTATCACTTAGATTAAGAAATGAAGAACATGTACTCATAATTTTGGATGACTTATGGTATAAGCTTGATCTGCAAAAGATTGGGATTTTAAACAATCACTGTAAAGTCCTCTTAACTACGAGAAGTCAACAAGTTGCATATTTGATGGGATGTCAACGCAGCTTTCATCTATTTCTTTTAACTTTAGAAGAAAATTGGGATTTGTTCAAGAGGTGCGCAGGCATCCATGATGATCGGTTCGAGCCGGACTTACTTGCTATAGCAAAGGAAGTTTCAGCACACTGTGAAGGATTACCACTTACCATTTCAATATTGGGGTCAGCTCTAAGAGCAAGAACTGTTTACCTGTGGAAACAAGTCTTAAAAGATTTAATGAGTTCAAGAGGGAAGGGTTTGAATTGGGAAGATGATAGTACTAATTTTATAATCCAAATAATAGTGGTGATCTATAATATTATACTTGCAAGCAAAGAAACTAAAATCATATTCTTAATATGTGGTATGTATCCAGAAGATCATGAAATTCTCATTGAAGATCTGTTCCAACATGTAATTAGACTAAGGTTGTGCAGCAAAACTGATGTGATTGCAACCATCACTAGCCTCAAGGACTCTAGCTTGTTGATGCCTTCMATTACAAGTAAAGACCATGTGCTAATGCATGATTTGGTCCGTTATGCTGCTAGGAAGATAATCTTTAAAGAGAAACCTACCAAYAGGGACAATATCAGTGAGTATATGAATGCGCTTTATAATGAGGAACATTTTCAATGGCAAGAGGCATTACATCAACTTCTTTGTCGGTTGTTTGGTGCAACTGAGTATCCAGAATCTTCTTCTTCAACAAGTTCGGAGCTCCAAGTYGCACAGTCCTACTCCTCTACAATTCCTAGGCCATCAGGGAAGATGGTGGATTTTTATGGATTGTGTCAGGTTGACAAATCATTTCTGCCACTGCTCAAAGAAGCATGCACCAAGAATCCAAATCTGATAGAAAGCCAGAGAAAACACTCTGAAATGTTAAGGCAGAGTGCTTTTGATAGCTTAGGAAGGTTGTTGTTTCTGTTGCATAATGTTAGGATTAGAGATTGGATAAACCATAAACAAGAACTGCAGATGTATTGGGAGCAGGCAAAGCTCATGAAGTTCGATTTGGAATGGTYGAGTCCTGCTATGGAACRAGTCCTATCTTCGGCCGATCTTGCAAGGATYGAAGCATTGCGTGAGGAAGAGAAGTATTGGAACGAAGAAGCTTCTAAGCTAAGAGAGAAACTCAAGATTGTGGAGGATAAAGCTGCAGTCATTAGAACTGAGATTGTCCTCACAGAGTCTAAGTTGGATGGTTTTGCAATTGGTTATGGTTCAGAGGCTGGGGTTGTTTCCAAAGTCAGTCCTTGGAGGAAAATTTTTCTATTTAGATAA 1839 0.3953 MGHQGHVLTTKPEHLRRKLETKVEQVQEQVKNTVQVDRIEGGCFMQFDFESRQSTFNGILEALQDDSISSVAVYGMGGVGKTTLARHVGKRVKEMNMFDLVLPVHVTTAENVKRIQGDIAAGLGLRLGEESDLAERQRQLSLRLRNEEHVLIILDDLWYKLDLQKIGILNNHCKVLLTTRSQQVAYLMGCQRSFHLFLLTLEENWDLFKRCAGIHDDRFEPDLLAIAKEVSAHCEGLPLTISILGSALRARTVYLWKQVLKDLMSSRGKGLNWEDDSTNFIIQIIVVIYNIILASKETKIIFLICGMYPEDHEILIEDLFQHVIRLRLCSKTDVIATITSLKDSSLLMPSITSKDHVLMHDLVRYAARKIIFKEKPTNRDNISEYMNALYNEEHFQWQEALHQLLCRLFGATEYPESSSSTSSELQVAQSYSSTIPRPSGKMVDFYGLCQVDKSFLPLLKEACTKNPNLIESQRKHSEMLRQSAFDSLGRLLFLLHNVRIRDWINHKQELQMYWEQAKLMKFDLEWXSPAMEXVLSSADLARIEALREEEKYWNEEASKLREKLKIVEDKAAVIRTEIVLTESKLDGFAIGYGSEAGVVSKVSPWRKIFLFR* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0058 612 CDD AAA 59 159 - -
Amo17g0058 612 Gene3D - 199 275 IPR042197 -
Amo17g0058 612 PRINTS Disease resistance protein signature 144 158 - -
Amo17g0058 612 PRINTS Disease resistance protein signature 70 85 - -
Amo17g0058 612 PRINTS Disease resistance protein signature 234 248 - -
Amo17g0058 612 Pfam NB-ARC domain 55 290 IPR002182 GO:0043531
Amo17g0058 612 Coils Coil 16 36 - -
Amo17g0058 612 Coils Coil 543 577 - -
Amo17g0058 612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 305 IPR027417 -
Amo17g0058 612 PANTHER DISEASE RESISTANCE PROTEIN RFL1-RELATED 29 402 - -
Amo17g0058 612 PANTHER DISEASE RESISTANCE PROTEIN RP 29 402 IPR044974 GO:0006952
Amo17g0058 612 Gene3D - 44 194 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0058 Amo-Chr17 673259 675912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0058 68 251 WRKY Transcription Factor Family AT5G45050 27.979 2.04e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0058 - - aip:107606510 1125.54