Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0051 ATGGTAGTTGAGGCTCAAGTTCCTCTACTTGAGTGTGTAATGAACGTTGTGAATGAAGATTATCCAGGTTCAGTAGTTGATGAACATTGTGAAATGAAGAAGCAGTGGAATCAGAAACTCCAATCTCCCTCAGGGGACAACTTGGTATCAGTAGGGGAACTTTGGACTGATGGACTAATCTGTGCCTTTGAGTTCATCAAGGGAGTTAGAGATGTGGCAAAGAAAAGATTTGAAGGAAGAAAGTTTAGTAGGAATGGCTGTGTTGATTCACCCCCAACTTTGCTAGATCAATCTGGAACTGGMGGTCTTGATGATGGTTTAGATGATTATCACCAATCACCTCATCAATTCATTGGCAAAGAGGGTCTTCCTAGAAGTTACTGGAGGCCAATTGGTTGGTCTAGGATCTCCGAACTTGTGCAGGCAGTGCGAACRGATGATGCTTTGAAAGATGAAAGTAGATTAATAAGTGAACGAATGAAGCACCTTTTATATGAGGTTCCAGTCCGAGTCGCTGGCGGTCTGCTATTTGAACTTCTGGGGCAGTCAGCTGGTGATCCTTTAGCAGAGGAAGATGACATACCTGTTGTACTCCGATCATGGCAGGCGCAAAACTTTTTAGTTACAGCCATGCATGTAAAGGGTTCTGCATCAAACATAAATGTATTAGGCATTCTAGAAGTTCAGGAGCTGCTTGCTGCTGGAGGTGCTAACATTCCGCGCACCATTCATGAAGTTGTAGCACACTTAGCTTGCCATCTTGCACGATGGGACGATAGGTTGTGGCGTAAACACATCTTTGGGGCTGCAGATGAAGTTGAGTTGATGTTTATGAACAGGAGAAACCATGAGGATTTACATCTATTCACAATAATATTGAACCAGGAAATTAGAAGATTATCGACCCAGGTTATAAGAGTGAAATGGTCGCTCCATGCGCGAGAGGAAATTGTTTTTGAACTTCTTCAACAGTTGAGAGGGAATACAACAAGAGCCTTGCTGGAAGGAGTAAGAAAGAGTACTAGGCAAATGATTGAGGAGCAAGAAGCAGTTCGAGGACGGTTGTTCACCATACAAGATGTCCTGCAAAGCACAGTCCGTGCATGGTTGCAGGATAAAAGCCTCACAGTTACGCATAACCTTGGAATATTTGGGGGTTGTGGCCTTGTTCTTTCCATCATCACCGGACTATTTGGTATAAACGTTGACGGAATACCTGGAGCCGAAGGAACTCCTTATGCGTTTGGTCTATTCTCTGCCGTCTTGTTTGTGTTGGGAGCTATACTTATTGGAATAGGATTGGTTTATCTCGGTTTGAAGAAACCCATAATGCAAGAAAATGTTGCAGTGAGAAAGCTGGAGCTTGAAGAGCTGGTCAGGATGTTTCAACATGAAGCAGAAACTCATGCTCAAGTGCGAAAAACAGGTCCTCAGATGGATGTTCCACCAACTGCAGAAGTTAGGGGGGCACCAAGTGTTTATAGATATTTGTACTTTTGTATGTCTCCAACTGTATCTGAATGCACCATGTTGTCTTCACTATGCATGAGTCCCTTCTCCAGCAAAGGAGAAGAAGCACATTCACCACCAAGCACACGAACATCACACCATGAACTATGTCTCCATGATCATGCTCTTACTGCTCCATCACTGAGCCAATCCACATCTCCTTATATAAACCTCTTAGAAAACTTGAGCATCACAAAAAGGATGACTGCACATCGCTCACGTTCTGCACCGGCCGTACTATTCACCGACACTGGCATAGACTTTCATGAGCCCTCTGAACCTAGACCTATACAAAATTCATCAACCTTAATGGTAAGGGTATCTTTCATCTCTGTATTCTTGTATTTGGCAATTGGTGTTGCAGTGTACATGATAAATGGGAGTTTCAAGGGTACCACCACACTTAAGCTTATAGATGCTATTTACTTCACAGTAGTAACTCTAAGCACAATTGGATTTGGAGATATTGTTCCTGATGCAACATCTACCAAGATCTTTACCTGTGGTTTCATTTTGGTTGGTTTTGGACTTACTGGTTTTCTCCTCAGCGGCTTGGTTGAATACATCTGTGATACTCAAGAAGCATTCACYTTGAGCATGATGGATGAGAATAGATATAAGAGAATTCTCTGGACTTACATAGTTGATGAAGAGAAAGGAAGAATGCGAATTCGGACAAAAGTTTCTTTAGCTTTGGTMGTTGTCATRGMCTGCATCGCAACAGGAGCAGTCACAGCTCACTTTCTAGAGGGTATGGATTGGATAGACAGTTTCTATCTCTCCATTACGTCTGTTACGACAGTTGGTTATGGCGATTATGCTTTCAAAACTGTAACTGGAAGATGCTTCGCGATTATCTGGCTTTTGGTAAGTACATTGGCAGTTGCTAGGGCCTTTCTGTACCTAACTGATTATAGCATGCACAAGAGGAAACGTAAGGTAGCAAAATTGGTTCTTCATAAGAAGATAACTATGTCAGATTTAGTAGCTGCAGACCTTGATAATGATGGATCAATAAGCAAGTCCGAATTTCTTATCTACAAGCTCAAGGAAATGGGAAAAATAACTGAGATTGACATTCTGCAAATAAGCAAACAATTTGATTCCTTGGGTTGTGGCATCTATGGCAAGATTAGTGTTGCTGACCTTATGGTAAATGTCTAA 2673 0.4209 MVVEAQVPLLECVMNVVNEDYPGSVVDEHCEMKKQWNQKLQSPSGDNLVSVGELWTDGLICAFEFIKGVRDVAKKRFEGRKFSRNGCVDSPPTLLDQSGTGGLDDGLDDYHQSPHQFIGKEGLPRSYWRPIGWSRISELVQAVRTDDALKDESRLISERMKHLLYEVPVRVAGGLLFELLGQSAGDPLAEEDDIPVVLRSWQAQNFLVTAMHVKGSASNINVLGILEVQELLAAGGANIPRTIHEVVAHLACHLARWDDRLWRKHIFGAADEVELMFMNRRNHEDLHLFTIILNQEIRRLSTQVIRVKWSLHAREEIVFELLQQLRGNTTRALLEGVRKSTRQMIEEQEAVRGRLFTIQDVLQSTVRAWLQDKSLTVTHNLGIFGGCGLVLSIITGLFGINVDGIPGAEGTPYAFGLFSAVLFVLGAILIGIGLVYLGLKKPIMQENVAVRKLELEELVRMFQHEAETHAQVRKTGPQMDVPPTAEVRGAPSVYRYLYFCMSPTVSECTMLSSLCMSPFSSKGEEAHSPPSTRTSHHELCLHDHALTAPSLSQSTSPYINLLENLSITKRMTAHRSRSAPAVLFTDTGIDFHEPSEPRPIQNSSTLMVRVSFISVFLYLAIGVAVYMINGSFKGTTTLKLIDAIYFTVVTLSTIGFGDIVPDATSTKIFTCGFILVGFGLTGFLLSGLVEYICDTQEAFTLSMMDENRYKRILWTYIVDEEKGRMRIRTKVSLALVVVXXCIATGAVTAHFLEGMDWIDSFYLSITSVTTVGYGDYAFKTVTGRCFAIIWLLVSTLAVARAFLYLTDYSMHKRKRKVAKLVLHKKITMSDLVAADLDNDGSISKSEFLIYKLKEMGKITEIDILQISKQFDSLGCGIYGKISVADLMVNV* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0051 890 Pfam CorA-like Mg2+ transporter protein 295 429 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Amo17g0051 890 ProSitePatterns EF-hand calcium-binding domain. 835 847 IPR018247 -
Amo17g0051 890 PANTHER MAGNESIUM TRANSPORTER CORA-LIKE FAMILY PROTEIN 8 146 - -
Amo17g0051 890 PANTHER MAGNESIUM TRANSPORTER CORA-LIKE FAMILY PROTEIN 148 493 - -
Amo17g0051 890 PANTHER MAGNESIUM TRANSPORTER CORA FAMILY PROTEIN 148 493 - -
Amo17g0051 890 PANTHER MAGNESIUM TRANSPORTER CORA FAMILY PROTEIN 8 146 - -
Amo17g0051 890 Gene3D - 597 713 - -
Amo17g0051 890 Gene3D - 718 831 - -
Amo17g0051 890 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 429 IPR045863 -
Amo17g0051 890 Pfam Ion channel 739 808 IPR013099 -
Amo17g0051 890 Pfam Ion channel 614 692 IPR013099 -
Amo17g0051 890 SUPERFAMILY Voltage-gated potassium channels 705 826 - -
Amo17g0051 890 PRINTS Two pore domain K+ channel signature 769 778 IPR003280 GO:0005267|GO:0016020|GO:0071805
Amo17g0051 890 PRINTS Two pore domain K+ channel signature 649 677 IPR003280 GO:0005267|GO:0016020|GO:0071805
Amo17g0051 890 SUPERFAMILY Voltage-gated potassium channels 606 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0051 Amo-Chr17 633272 638367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0051 574 887 Ion Channels AT4G18160 50.629 2.16e-95 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0051 - - adu:107496492 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0051 17 633272 638367 Amo17g0051 17 633272 638367 ECH