Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0030 ATGGAGACTGTGATCTTTAGAAGAATTGTGTTGATGGTGATGATGACTTCAATGATGGTAAAGATGGCAAAATCGGAATTGCACTATGTTGGAGGAAACAAGTTTAGTTGGGTTCCTAATGTTAATTTGACACAATGGTCAATGCATCAGCATTTTTATGTGCATGACTGGCTATATTTTGGATATGACAGGCACATGCACAATGTGTTGGAAGTGAATAAGACAAGCTATGAGAACTGCATAGACAAAGATTTCATTAAGAACATAACAAGGGGAGGTGGAAAAGATGTCATTGAACTGAAAGAAGTGAAGACTTATTACTTCTTGAGTTCAGGTGGTTTCTGTTGGAATGGTTTAAAAGTTGCAATTAATGTTGAAAATGTTGCACCAAGTCCATCACCTGGTTCACCAGGACATAATAAATCTTCATCTTGTACCATTGGTATCAACCAAAATCTTGTGATCCTCCTAATATTGATGTGGGGCATCATCATCTTCAAATGA 504 0.369 METVIFRRIVLMVMMTSMMVKMAKSELHYVGGNKFSWVPNVNLTQWSMHQHFYVHDWLYFGYDRHMHNVLEVNKTSYENCIDKDFIKNITRGGGKDVIELKEVKTYYFLSSGGFCWNGLKVAINVENVAPSPSPGSPGHNKSSSCTIGINQNLVILLILMWGIIIFK* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0030 167 Gene3D - 25 129 IPR008972 -
Amo17g0030 167 Pfam Plastocyanin-like domain 37 118 IPR003245 GO:0009055
Amo17g0030 167 PANTHER BLUE COPPER PROTEIN 9 159 IPR039391 GO:0009055
Amo17g0030 167 SUPERFAMILY Cupredoxins 26 125 IPR008972 -
Amo17g0030 167 ProSiteProfiles Phytocyanin domain profile. 26 127 IPR003245 GO:0009055
Amo17g0030 167 PANTHER EARLY NODULIN-LIKE PROTEIN 20 9 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0030 Amo-Chr17 382585 384930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0030 9 162 Phytocyanin Superfamily AT2G27035 44.805 2.20e-44 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0030 - - aip:107606563 314.694