Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0029 ATGGGTTTTCAGACTATGGGTTCTCAGAGTAATGGGCAACAGTCTCATTTACAGTTACAGCCACCACAGTTATCTAGGCAAGGTTCCTGGTATAGTCTCACACTTGATGAGGTTAATAATCAGCTAGGAGACTTGGGGAAGCCGATGGGGAGCATGAACCTCGACGAGCTTCTCCAAAATGTGTGGACTGCCGAGGCGAGTAAAGTTGTTGGGGTACAAAATGAGCAGATGTCATCTTCGTCTTCCCTTCAACGCCAGGCCAGTCTGACACTGGCTCGTGCGTTGAGTGGGAAGACGGTTGATGATGTTTGGAAAGAAATCCAACAGGGGCAGAAAAAACGATTTGGAGACAATGTTAAAATTGAAGGTGGAGAAATGACTTTTGGTGAAACAACATTAGAGGACTTTCTGGTACAAGCAGGTCTCTTTGCTGAAGCTTCTGTGAGTCCGAATGTGGGGTTGAACAGAWTGGATTCTGCCACCACACAAAGTTTACAACAAAAATCAGGYGYGTCGCCSTCCGCTTCGGTTAGCAGTTTGTCGGACACAAARCCGGGTCGCAAAAGGGATGCTCCAGATGCATATGAGAAAGCTTTAGAAAGGAGGCTGAGAAGGAAAATCAAGAATAGGGAATCTGCGGCACGCTCACGGGCAAGAAAACAGGCATATCATAATGAATTGGTTAGCAAGGTTTCTCGACTAGAAGAAGAAAATGTAAAGCTCAAGAAAGAGAAGGAATTCGAAGAGAAGCTACCATCCGAATCACCATCCGAACCAAAATATCAGCTTCGAAGAATAAGTTCTGCTTTTTTCTGA 816 0.4498 MGFQTMGSQSNGQQSHLQLQPPQLSRQGSWYSLTLDEVNNQLGDLGKPMGSMNLDELLQNVWTAEASKVVGVQNEQMSSSSSLQRQASLTLARALSGKTVDDVWKEIQQGQKKRFGDNVKIEGGEMTFGETTLEDFLVQAGLFAEASVSPNVGLNRXDSATTQSLQQKSGXSPSASVSSLSDTKPGRKRDAPDAYEKALERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENVKLKKEKEFEEKLPSESPSEPKYQLRRISSAFF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0029 271 Gene3D - 199 251 - -
Amo17g0029 271 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Amo17g0029 271 MobiDBLite consensus disorder prediction 183 207 - -
Amo17g0029 271 CDD bZIP_plant_BZIP46 201 238 - -
Amo17g0029 271 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 38 269 IPR043452 GO:0003700|GO:0045893
Amo17g0029 271 MobiDBLite consensus disorder prediction 1 24 - -
Amo17g0029 271 Pfam bZIP transcription factor 201 246 IPR004827 GO:0003700|GO:0006355
Amo17g0029 271 SUPERFAMILY Leucine zipper domain 201 247 IPR046347 GO:0003700|GO:0006355
Amo17g0029 271 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 244 IPR004827 GO:0003700|GO:0006355
Amo17g0029 271 PANTHER BZIP TRANSCRIPTION FACTOR 38 269 - -
Amo17g0029 271 MobiDBLite consensus disorder prediction 152 182 - -
Amo17g0029 271 MobiDBLite consensus disorder prediction 152 224 - -
Amo17g0029 271 Coils Coil 224 251 - -
Amo17g0029 271 SMART brlzneu 197 269 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0029 Amo-Chr17 353264 357133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0029 24 271 bZIP Transcription Factor Family AT3G56850 46.479 2.12e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo17g0029 bZIP_1 1.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0029 K14432 - gmx:100798549 370.163