Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo17g0006 | ATGGGAAATTGCTTCATAAAACCAGTTGCTCATGTTTCCTCCACAACCCTTTTTGGGAGTAGTAATAAATCTCAAACTAAGCCAAAGCAGAATTCAAGTCCTCCAAAACAAAAATCTTCTGCTCAAACTTCAGTGTCAAATGCTATTGAGAGAACAATTTCTAGCAGCCTTAAGTCCTTCTCCTTTAGTGATCTGAAGGAGGCAACTAAGAACTTCCGGCGAGAGAATTTGATCGGCGAGGGAGGGTTCGGGTTTGTGTACAAAGGGTGGATAGATGAGAACACTTTTGCTCCCACAAAACCAGGGACTGGTATAGTAGTAGCCATAAAGAAGCTTAAGCCAGAAAGCTTTCAAGGACACCAAGAATGGCTTGCAGAAGTGAACTATCTAGGGCAGCTTCACCATGAAAATCTTGTAAGACTTATTGGTTATTGCTTGGAAGGGAAGAATAGGCTTCTAGTTTATGAGTTTATGCAGAAAGGAAGTTTGGAAAACCATTTATTCAGAAAAGGTGTTCAACCAATTCCATGGATTATGAGGATCAACATCGCCATAGCTGTTGCTAGAGGATTAGCATTCTTGCATTCCCTCGATTCAAATATCATTTTTCGCGATTTAAAGGCTTCCAATGTCCTACTTGACTCTGATTTCAATGCAAAGATTTCGGATTTTGGCTTGGCAAGAGACGGTCCTACCGGAGATAATACACACGTTTCAACCAGAATTATTGGAACTCATGGTTATGCTGCACCAGAGTATGTAGCTACAGGTCATTTGACCCCAAGGAGTGATGTATACAGCTTTGGCGTTGTCTTGCTAGAGTTATTAACCGGAAGGCGTGTAGTCGAAAACGAGAAAGAAGGAATTCCAGAAGAAACATTGGTGGATTGGGCGAGGCCATTCCTAAGTGATAGCAGAAGGATTTTGAGAATCATGGATACCAGGTTGGGTGGACAGTACTCTAGGAAAGGAGCTCAAGCCGCGGCCGCACTCGCCTTGCAGTGCCTGAATGCTGATCCAAAATATAGGCCACAAATGGTGAATGTTTTAGCTGCATTGGAAGCACTTCAATCCACAAATTCAATCACAAGGACCCCAAAAAGGGCAACTGAGAGTAGTGCAACCAGCAAACATTCTTCTAATCATTCCCAAAAGTCACTTTCAAGTGCTCAAAAACTATGA | 1182 | 0.4239 | MGNCFIKPVAHVSSTTLFGSSNKSQTKPKQNSSPPKQKSSAQTSVSNAIERTISSSLKSFSFSDLKEATKNFRRENLIGEGGFGFVYKGWIDENTFAPTKPGTGIVVAIKKLKPESFQGHQEWLAEVNYLGQLHHENLVRLIGYCLEGKNRLLVYEFMQKGSLENHLFRKGVQPIPWIMRINIAIAVARGLAFLHSLDSNIIFRDLKASNVLLDSDFNAKISDFGLARDGPTGDNTHVSTRIIGTHGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRVVENEKEGIPEETLVDWARPFLSDSRRILRIMDTRLGGQYSRKGAQAAAALALQCLNADPKYRPQMVNVLAALEALQSTNSITRTPKRATESSATSKHSSNHSQKSLSSAQKL* | 394 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo17g0006 | 393 | Pfam | Protein tyrosine and serine/threonine kinase | 75 | 351 | IPR001245 | GO:0004672|GO:0006468 | |
Amo17g0006 | 393 | MobiDBLite | consensus disorder prediction | 361 | 393 | - | - | |
Amo17g0006 | 393 | SMART | serkin_6 | 72 | 356 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo17g0006 | 393 | PANTHER | OS01G0588500 PROTEIN-RELATED | 19 | 382 | - | - | |
Amo17g0006 | 393 | ProSitePatterns | Protein kinases ATP-binding region signature. | 78 | 111 | IPR017441 | GO:0005524 | |
Amo17g0006 | 393 | SUPERFAMILY | Protein kinase-like (PK-like) | 39 | 353 | IPR011009 | - | |
Amo17g0006 | 393 | CDD | STKc_IRAK | 78 | 356 | - | - | |
Amo17g0006 | 393 | Gene3D | Phosphorylase Kinase; domain 1 | 46 | 157 | - | - | |
Amo17g0006 | 393 | Gene3D | Transferase(Phosphotransferase) domain 1 | 158 | 382 | - | - | |
Amo17g0006 | 393 | ProSiteProfiles | Protein kinase domain profile. | 72 | 356 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo17g0006 | 393 | PANTHER | TYROSINE KINASE FAMILY PROTEIN | 19 | 382 | - | - | |
Amo17g0006 | 393 | MobiDBLite | consensus disorder prediction | 17 | 45 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo17g0006 | Amo-Chr17 | 124718 | 128210 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo17g0006 | 32 | 392 | Glycoside Hydrolase | AT3G07070 | 43.164 | 4.44e-100 | 301 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Amo17g0006 | PK_Tyr_Ser-Thr | 8.9e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo17g0006 | - | - | gmx:102664409 | 597.045 |