Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4089 ATGACTGGAAGAAAGTCTATCACCCAACTGAGTTCAGATGCTGCTATACTTATGCGGGGCCATCCAGATCTTATTGACCAGTTTAACAAATGGATTCCCCGTACTCGTCAAGATTCATGCACGTTACTCTCCCACCACTTGGCAGCAACACATTTGGAGAACCGTGATCTACAGGATGAGGGCGATGATGAAGTATCTACGGATACGGATACTGATACGGATAGTGATACTGAAGATTGGGACTGGTTGAAAAGGTCGACTAAGCTTGGTGGATGTACAGACCCCTATAAAGTTTGGAAAATTTGGAAAAAGATCAAGGATCGGTTTAAGTGCGATATGGAGATTTGCGAGTCGCTAAGAAATAAGGTGGACAAGTACAAAGATGGAAGAAAGTCTATCATCCAACTAAGTTCGGACGTTGCTACACTTTTGCGGGGCCATCCCGATCTTATTGAGGAATTTCGCAAATGGATTCCCATCACTCCGAATGAGGGATCCGATGAAGTATCTAGCGATACCAGCAGCTTTAGTTCCACTGATACTGACACTGATATATACACTGATATATCTTCAGATGCCATGGATTAA 588 0.4337 MTGRKSITQLSSDAAILMRGHPDLIDQFNKWIPRTRQDSCTLLSHHLAATHLENRDLQDEGDDEVSTDTDTDTDSDTEDWDWLKRSTKLGGCTDPYKVWKIWKKIKDRFKCDMEICESLRNKVDKYKDGRKSIIQLSSDVATLLRGHPDLIEEFRKWIPITPNEGSDEVSSDTSSFSSTDTDTDIYTDISSDAMD* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4089 195 MobiDBLite consensus disorder prediction 162 195 - -
Amo16g4089 195 MobiDBLite consensus disorder prediction 59 77 - -
Amo16g4089 195 SUPERFAMILY PAH2 domain 103 159 IPR036600 GO:0006355
Amo16g4089 195 MobiDBLite consensus disorder prediction 164 195 - -
Amo16g4089 195 MobiDBLite consensus disorder prediction 54 77 - -
Amo16g4089 195 Gene3D Paired amphipathic helix 102 159 IPR036600 GO:0006355
Amo16g4089 195 ProSiteProfiles PAH domain profile. 85 161 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4089 Amo-Chr16 153359629 153363594 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo16g4089 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4089 - K11644 adu:107495749 199.519