Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4059 TGGTCTGCAATAGCATCTCAACTTCCTGGCAGAACAGACAATGATGTCAAAAACTATTGGAACACCAAGCTCAAGAAGAAGCTAATGGCAGGAAAAGTAATTTCCCCTAATAATAATAATAATAATAAAACATTATTGACTACTCAACAAAACTCAGATTTTCAAGATAATAAAAATTGTTCACCACCCTCATCATCATCATCATTAGTGCATCTTCCAATTTTAAGCAATGATATTAATAATTTTAGTTCTAACCTAAGTCTTGACCTAATTCATCAACAACTCTATAGTCCACAATTTATGAATTTAGAAATTGGTGGTGCAAATTCAAGGAACAACAAGAATAATAATAGTAGTAGTAATATTGAAGGTTCAACTTCTTCTTCATCACTTGCATTATTGGACTACAAGGGTGGATCATCACTTCTAGAAGAAGAAAAACAACATGGTGAATTCTTGATGGATTTAGGGTTTGATGGTGAATTTTCTCAAAGTATTAGTAGTTTTGTTACTCTGAGTGGGTTGATTTCAACTGTGCTGAAATAA 546 0.3223 WSAIASQLPGRTDNDVKNYWNTKLKKKLMAGKVISPNNNNNNKTLLTTQQNSDFQDNKNCSPPSSSSSLVHLPILSNDINNFSSNLSLDLIHQQLYSPQFMNLEIGGANSRNNKNNNSSSNIEGSTSSSSLALLDYKGGSSLLEEEKQHGEFLMDLGFDGEFSQSISSFVTLSGLISTVLK* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4059 181 MobiDBLite consensus disorder prediction 107 126 - -
Amo16g4059 181 PANTHER OS09G0431300 PROTEIN 1 129 - -
Amo16g4059 181 Pfam Myb-like DNA-binding domain 1 22 IPR001005 -
Amo16g4059 181 ProSiteProfiles Myb-like domain profile. 1 24 IPR001005 -
Amo16g4059 181 CDD SANT 1 24 IPR001005 -
Amo16g4059 181 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 28 IPR017930 -
Amo16g4059 181 Gene3D - 1 61 - -
Amo16g4059 181 PANTHER TRANSCRIPTION FACTOR RAX3 1 129 - -
Amo16g4059 181 SUPERFAMILY Homeodomain-like 1 31 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4059 Amo-Chr16 153027289 153027863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4059 1 30 MYB Transcription Factor Family AT4G37780 83.333 4.03e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo16g4059 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4059 K09422 - gmx:100789985 92.0485