Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4055 ATGGCGCGGCGGATGCGGCAAAAAGGGGATATTCGTGCGGCACAGATGATGAGGATGAAGGATCTTTGGCTGAACCGCAATAAGCGAATCGTCAGAGCGATTCCCGGTGTGTATGTTGGCGACGTGTGCCTCTTTCGGATGGAATTGTGTGTCCTTGGATTGCACGCTTCCATGAGCCCCAACAATGAGCCAATTGCAACGAGTGTTATTGTCTCCGGTGACTACGAGGATGATATGGACGAAGGAGATGTCATAATTTACACTGGACAAGGCGGGCAGGCCATGAATTATAAAAAAAAAACATTCATTTAA 312 0.4808 MARRMRQKGDIRAAQMMRMKDLWLNRNKRIVRAIPGVYVGDVCLFRMELCVLGLHASMSPNNEPIATSVIVSGDYEDDMDEGDVIIYTGQGGQAMNYKKKTFI* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4055 103 ProSiteProfiles YDG domain profile. 32 103 IPR003105 -
Amo16g4055 103 SMART G9a_1 27 101 IPR003105 -
Amo16g4055 103 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 4 100 - -
Amo16g4055 103 Gene3D - 12 102 IPR036987 -
Amo16g4055 103 SUPERFAMILY PUA domain-like 15 100 IPR015947 -
Amo16g4055 103 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 4 100 - -
Amo16g4055 103 Pfam SAD/SRA domain 32 96 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4055 Amo-Chr16 152984571 152984915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4055 7 101 Su(var)3-9 homologs AT5G04940 37.736 1.78e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4055 K11420 - aip:107626851 170.244