Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4047 ATGGATGATTCAACCTCAGATTGTCAGATGAATCAGGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTCTCTCTGTTGTTGATGACCAGTTTGTTCCGAAGGTTGGAATGATCTTTACCACCCTTGAAGATGTTGGAAAATTTTACAGGAACTATGCCAAGGCTGCAGGTTTTTCTACAAGAGTTCGGAGTACAAATAGGAAGGAAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGAGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGGCCAATCCGACAGCCAGTTTAAACTGTCATGCAAGAATTTATATACACACATTGAAGGATATCGGTGCTTGGATCATTTCAAAGGTTGTACTGGATCATTCACACCCCTGCAAATGCCACAAAGAAGAAGAAAACAAAAGTTTTAAGCGAGATAAACTTGTTTGA 459 0.39 MDDSTSDCQMNQGEVDYEFESNEVPEPLSVVDDQFVPKVGMIFTTLEDVGKFYRNYAKAAGFSTRVRSTNRKENEIKNQLITCSRERKWKSKISPTEKANPTASLNCHARIYIHTLKDIGAWIISKVVLDHSHPCKCHKEEENKSFKRDKLV* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4047 152 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 142 - -
Amo16g4047 152 Pfam FAR1 DNA-binding domain 51 135 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4047 Amo-Chr16 152737597 152738579 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g4047 FAR1 1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4047 - - adu:110278638 243.432